SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene45977

Length: 227 nt

UniGene Fasta

>sp_v2.0_unigene45977
CAACAAATACAAGGAAGAGACTATGTCCTAAAACCTTAAAGCTCAAAGGGCTCATCAAAGGCAGAAATGTCGATATACTTATAGATTCGGGTAGTACTCACAATTGTATAAACATTGATCTTGCTAAACAACTTGGTCTCTGTATATCACCAATCAAGGACCTGAGCATGTTTGTTGCTACTGGAATGAAAATCAATGAAATAGGAGTGTCAAAGAGTTTCAAATAA

Ace file of the UniGene sp_v2.0_unigene45977

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO	-	-	4.0e-06	40%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	34%
Blast2go	polyprotein [Ananas comosus]	-	-	1.17742e-07	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6GVT4

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 74 aas, your sequence is shorter than subject: 75 - 188

Fln protein: TNTRKRLCPKTLKLKGLIKGRNVDILIDSGSTHNCINIDLAKQLGLCISPIKDLSMFVATGMKINEIGVSKSFK*

Protein Length: 76

Fln nts: CAACAAATACAAGGAAGAGACTATGTCCTAAAACCTTAAAGCTCAAAGGGCTCATCAAAGGCAGAAATGTCGATATACTTATAGATTCGGGTAGTACTCACAATTGTATAAACATTGATCTTGCTAAACAACTTGGTCTCTGTATATCACCAATCAAGGACCTGAGCATGTTTGTTGCTACTGGAATGAAAATCAATGAAATAGGAGTGTCAAAGAGTTTCAAATAA

Fln Alignment:

AllPineV4_c44171___PKTLKLKGLIKGRNVDILIDSGSTHNCINIDLAKQLGLCISPIKDLSMFVATGMKINEIGVSK
F6GVT4_______________PGTMKIKGTIRSKEVIILVDSGATHNFLSLELVQQLALPLTTITSYGVMMGIGISMKGKGICR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain