SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene44867

Length: 208 nt

UniGene Fasta

>sp_v2.0_unigene44867
AGCAACATTGCTATACAAATTGCTGCTGGTAGCAGCCTCAAGGCCATTTACAAACATTATCACAACAGCGGTAATCTTACATTGCAAGAATTCATCATTCTGTTCGGAGTGTTTGAATTGTTTTTGTCACAATTTCCAGACATCCATTCTTTGAGATGGGTGAATTCAATTTGCACATTCAGCACAGTGGGATTTGCTGCCACAGCTA

Ace file of the UniGene sp_v2.0_unigene44867

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Proline transporter (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H8I0_POPTR	-	-	5.0e-26	80%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	80%
Blast2go	proline transporter	-	-	6.58616e-32	74%

Source	InterPros	Term	Type	Identity
Sma3	K Homology domain	IPR004087	-	-
Sma3	K Homology domain, type 1	IPR004088	-	-
Sma3	Amino acid transporter, transmembrane	IPR013057	-	-
Sma3		IPR018111	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7SQL8

Fln msg: Distance to subject end: 254 aas, your sequence is shorter than subject: 69 - 451

Fln protein: SNIAIQIAAGSSLKAIYKHYHNSGNLTLQEFIILFGVFELFLSQFPDIHSLRWVNSICTFSTVGFAATA

Protein Length: 70

Fln nts: AGCAACATTGCTATACAAATTGCTGCTGGTAGCAGCCTCAAGGCCATTTACAAACATTATCACAACAGCGGTAATCTTACATTGCAAGAATTCATCATTCTGTTCGGAGTGTTTGAATTGTTTTTGTCACAATTTCCAGACATCCATTCTTTGAGATGGGTGAATTCAATTTGCACATTCAGCACAGTGGGATTTGCTGCCACAGCTA

Fln Alignment:

AllPineV4_c42851___SNIAIQIAAGSSLKAIYKHYHNSGNLTLQEFIILFGVFELFLSQFPDIHSLRWVNSICTFSTVGFAAT
D7SQL8_______________NNIAIQIAAGSSLKAVYKYYHPDGALTLQHFIIFFGAFELFLSQFPDIHSLRWVNAVCTFSTIGFAGT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain