SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene41591

Length: 432 nt

Origin of reads: Uagpf v2

UniGene Fasta

>sp_v2.0_unigene41591
GATTTCTCTTCGCTGGATGTCAATGAAAGCTGCAGCAAGAGCAACGCGAAAGTCAAAACAAAGTGAGAACCCCGGAGGCTCACCATTCGTGGAACCAAGAGTCTGGTTATCGCGGACAACCTTCCACCTGTTGTGTGTGTTTGAAGTCATTTCTGCCACCACAGTCCCTTGGTCCCGTGGCAATTTCGAATTCTTCAATTCAATGCTGTATTGTTTGTGGCGTGGCGGCACATCTGTCCTGTTCTAAGATTGCATCCAGAGATGTAAATGTGTTGCGCAGGCTGATTCTCAGCAGCTGCTGCATCACTGGACTGAAGTATGGAATGAAATAGAGGACATTCCTGAAACATCTTATTACTGTACTTTTTGTAAAGAGCCATGCTGTGCTTCGTATCTGGCGCTTCGCAGTGAGTGACAGCCAAGGTCACGACG

Ace file of the UniGene sp_v2.0_unigene41591

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO	-	-	7.0e-23	44%
FL-Next	sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	34%
Blast2go	diacylglycerol kinase	-	-	1.1216e-22	59%

Source	ECs	Term	Type	e value	Identity
Blast2go	Diacylglycerol kinase.	EC:2.7.1.107	-	1.1216e-22	59%

Source	KEGGs	Term	e value	Identity
Blast2go	Glycerolipid metabolism	00561	1.1216e-22	59%
Blast2go	Glycerophospholipid metabolism	00564	1.1216e-22	59%
Blast2go	Metabolic pathways	01100	1.1216e-22	59%
Blast2go	Phosphatidylinositol signaling system	04070	1.1216e-22	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	root development	GO:0048364	Biological Process	1.1216e-22	59%
Blast2go	response to wounding	GO:0009611	Biological Process	1.1216e-22	59%
Blast2go	leaf development	GO:0048366	Biological Process	1.1216e-22	59%
Blast2go	diacylglycerol kinase activity	GO:0004143	Molecular Function	1.1216e-22	59%
Blast2go	protein binding	GO:0005515	Molecular Function	1.1216e-22	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q39017

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 536 aas, your sequence is shorter than subject: 110 - 728

Fln protein: FLFAGCQ*KLQQEQRESQNKVRTPEAHHSWNQESGYRGQPSTCCVCLKSFLPPQSLGPVAISNSSIQCCIVCGVAAHLSCSKIASRDVNVLRRLILSSCCITGLKYGMK*

Protein Length: 111

Fln nts: GATTTCTCTTCGCTGGATGTCAATGAAAGCTGCAGCAAGAGCAACGCGAAAGTCAAAACAAAGTGAGAACCCCGGAGGCTCACCATTCGTGGAACCAAGAGTCTGGTTATCGCGGACAACCTTCCACCTGTTGTGTGTGTTTGAAGTCATTTCTGCCACCACAGTCCCTTGGTCCCGTGGCAATTTCGAATTCTTCAATTCAATGCTGTATTGTTTGTGGCGTGGCGGCACATCTGTCCTGTTCTAAGATTGCATCCAGAGATGTAAATGTGTTGCGCAGGCTGATTCTCAGCAGCTGCTGCATCACTGGACTGAAGTATGGAATGAAATAGAGGACATTCCTGAAACATCTTATTACTGTACTTTTTGTAAAGAGCCATGCTGTGCTTCGTATCTGGCGCTTCGCAGTGAGTGACAGCCAAGGTCACGACG

Fln Alignment:

AllPineV4_c38703___LQQEQRESQNKVRTPEAHHSWNQESGYRGQPSTCCVCLKSFLPPQSLGPVAISNSSIQCCIVCGVAAHLSCSKIASRD
Q39017_______________IARSKKNPKARHKVPVAPHSWELDPIARAKNLNCCVCLKSMSPSQA---IVASESFFHRCTICGAAAHFNCSSSAPKD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain