SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene39821

Length: 433 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene39821
GGTTCCTTTCGTCCCTTTCTGGTCGCAGTCTGTGAGTGTTTATGCCATCTATAAACATCTCTCCCTAATTAATTCCAACGGTCACATTCCGCCCAACAAAGAAGATTCCAAAGTCATGATTGACTATATTCCGGGTCTTCCTCCATTGAAGCGTGAGGATCTGCCATCAATTATCCAGGCGGGAGATACGTCTAGTGAATTTTATAAAGATCTCGTGCAACAGATCGCTTTGCTAGACGAGACAGAATGGATTATCGGAAATACAGTGTACGAACTCGAAAGTGAAGCAAGCGATGCAGTTCGAGAAACAGCAGCTCCCATCTACTCACTCGGTCCGTTTCTTCCACCAGTTTATCTCGAAGCCGAGTGCAAGCATAACGAGATTTCTGTGAATCCTACGTCACTAAGCCTGTGGGCAGAAACAGATTGTTCG

Ace file of the UniGene sp_v2.0_unigene39821 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp\|Q9SJL0.1\|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb\|AAD31582.1\| putative glucosyltransferase [Arabidopsis thaliana] gb\|AAL06924.1\| At2g36970/T1J8.15 [Arabidopsis thaliana] gb\|AA	-	-	2.0e-13	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	36%
Blast2go	udp-glycosyltransferase 86a1	-	-	2.73594e-20	53%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LNU7

Fln msg: Distance to subject end: 208 aas, your sequence is shorter than subject: 144 - 491

Fln protein: VPFVSFWSQSVSVYAIYKHLSLINSNGHIPPNKEDSKVMIDYIPGLPPLKREDLPSIIQAGDTSSEFYKDLVQQIALLDETEWIIGNTVYELESEASDAVRETAAPIYSLGPFLPPVYLEAECKHNEISVNPTSLSLWAETDCS

Protein Length: 145

Fln nts: GGTTCCTTTCGTCtCTTTCTGGTCGCAGTCTGTGAGTGTTTATGCCATCTATAAACATCTCTCCCTAATTAATTCCAACGGTCACATTCCGCCCAACAAAGAAGATTCCAAAGTCATGATTGACTATATTCCGGGTCTTCCTCCATTGAAGCGTGAGGATCTGCCATCAATTATCCAGGCGGGAGATACGTCTAGTGAATTTTATAAAGATCTCGTGCAACAGATCGCTTTGCTAGACGAGACAGAATGGATTATCGGAAATACAGTGTACGAACTCGAAAGTGAAGCAAGCGATGCAGTTCGAGAAACAGCAGCTCCCATCTACTCACTCGGTCCGTTTCTTCCACCAGTTTATCTCGAAGCCGAGTGCAAGCATAACGAGATTTCTGTGAATCCTACGTCACTAAGCCTGTGGGCAGAAACAGATTGTTCG

Fln Alignment:

AllPineV4_c36245___VPFVSFWSQSVSVYAIYKHLSLINSNGHIP-PNKEDS-KVMIDYIPGLPPLKREDLPSIIQAGDTSSEFYKDLVQQIALLDETEWIIGNTVYELESEASDAVRETAAPIYSLGPFLPPVYLEAECKHNEISVNPTSLSLWAETDCS
B8LNU7_______________ISHASFWTEAAMVFSIYYHWDLLVENGHSPFVNKEDDHENLINYIPGLSDLKTTDLPSYFQELDLSSRTHDILYEAFQSVRGADWIISNTVEDLESR-TIAELQSIKPFWSVGPLLPSAFQE------DLNKETSRTNMWPESDCT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain