SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene39520

Length: 643 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene39520

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative phosphatidylinositolglycan class N short form [Arabidopsis thaliana]	-	-	1.0e-32	62%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	63%
Blast2go	gpi ethanolamine phosphate transferase 1-like	-	-	3.56384e-37	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	3.56384e-37	76%

Source	InterPros	Term	Type	Identity
Sma3	GPI ethanolamine phosphate transferase 1	IPR007070	-	-
Sma3	Alkaline phosphatase-like, alpha/beta/alpha	IPR017849	-	-
Sma3	GPI ethanolamine phosphate transferase 1, C-terminal	IPR017852	-	-

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
49			25	75	0.996473
50			75	25	0.996473
52			25	75	0.996473
54			25	75	0.996473
66	75			25	0.996475
70	75			25	0.996474
71		25	75		0.996474
170		25	75		0.996473
235	75		25		0.996473
321			33	66	0.997453
327	75	25			0.996481
329		75		25	0.996481
330	75	25			0.996481
331			25	75	0.996481
333		75	25		0.996481
334	25			75	0.996481
338		66		33	0.997452
339		66	33		0.997452
340			33	66	0.997452
345		33		66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain