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UniGene Name: sp_v2.0_unigene39483
Length: 235 nt
Origin of reads:
 UniGene Fasta
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| >sp_v2.0_unigene39483
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Ace file of the UniGene sp_v2.0_unigene39483
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
|---|
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Met proto-oncogene n=1 Tax=Cavia porcellus RepID=Q07E11_CAVPO | - | - | 7.0e-21 | 86% |
| Blast2go | hepatocyte growth factor receptor- partial | - | - | 4.0782e-28 | 88% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | positive regulation of peptidyl-serine phosphorylation | GO:0033138 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | pancreas development | GO:0031016 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of dendrite morphogenesis | GO:0050775 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | adult behavior | GO:0030534 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of glucose transport | GO:0010828 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | oligodendrocyte development | GO:0014003 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | brain development | GO:0007420 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | response to organic cyclic compound | GO:0014070 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cellular response to arsenic-containing substance | GO:0071243 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | hepatocyte growth factor receptor signaling pathway | GO:0048012 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | liver development | GO:0001889 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | muscle cell migration | GO:0014812 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | myotube differentiation | GO:0014902 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cell aging | GO:0007569 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of DNA replication | GO:0045740 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | response to protein stimulus | GO:0051789 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of transcription from RNA polymerase II promoter | GO:0045944 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | myoblast proliferation | GO:0051450 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | sperm motility | GO:0030317 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | placenta development | GO:0001890 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cellular response to glucose stimulus | GO:0071333 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | negative regulation of transcription from RNA polymerase II promoter | GO:0000122 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | response to acid | GO:0001101 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | central nervous system neuron differentiation | GO:0021953 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cellular response to interleukin-6 | GO:0071354 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cellular response to peptide hormone stimulus | GO:0071375 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | protein autophosphorylation | GO:0046777 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of neuron projection development | GO:0010976 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | male gonad development | GO:0008584 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling | GO:0060665 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | cellular response to growth factor stimulus | GO:0071363 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | activation of MAPK activity | GO:0000187 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | response to drug | GO:0042493 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of mitosis | GO:0045840 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | positive regulation of peptidyl-threonine phosphorylation | GO:0010800 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | skeletal muscle tissue development | GO:0007519 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | response to wounding | GO:0009611 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | negative regulation of peptidyl-threonine phosphorylation | GO:0010801 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | lactation | GO:0007595 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | neuron migration | GO:0001764 | Biological Process | 4.0782e-28 | 88% |
| Blast2go | phosphatidylinositol 3-kinase binding | GO:0043548 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | hepatocyte growth factor-activated receptor activity | GO:0005008 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | beta-catenin binding | GO:0008013 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | protein complex binding | GO:0032403 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | phospholipase binding | GO:0043274 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | protein heterodimerization activity | GO:0046982 | Molecular Function | 4.0782e-28 | 88% |
| Blast2go | basal plasma membrane | GO:0009925 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | postsynaptic density | GO:0014069 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | flagellum | GO:0019861 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | extracellular space | GO:0005615 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | cytoplasm | GO:0005737 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | excitatory synapse | GO:0060076 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | postsynaptic membrane | GO:0045211 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | dendrite | GO:0030425 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | membrane fraction | GO:0005624 | Cellular Component | 4.0782e-28 | 88% |
| Blast2go | neuronal cell body | GO:0043025 | Cellular Component | 4.0782e-28 | 88% |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg:
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
| SNPs (tot: 4) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 86 | 33 | 66 | 0.997458 | ||
| 128 | 25 | 75 | 0.996473 | ||
| 160 | 75 | 25 | 0.996473 | ||
| 163 | 33 | 66 | 0.997452 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
