SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene39283

Length: 689 nt

Origin of reads: Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene39283 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp\|Q9CAL3.1\|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb\|AAG52471.1\|AC010796_10 putative protein kinase; 37247-3480	-	-	1.0e-08	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	49%
Blast2go	cysteine-rich repeat secretory protein 38-like	-	-	2.73958e-32	51%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	2.73958e-32	51%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	2.73958e-32	51%
Blast2go	response to ozone	GO:0010193	Biological Process	2.73958e-32	51%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	2.73958e-32	51%
Blast2go	plasma membrane	GO:0005886	Cellular Component	2.73958e-32	51%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	Probability
364	33		66	0.997452
380		33	66	0.997464
395	33	66		0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
189	202	CGG CGG CGG CGG CG	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain