SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene39003

Length: 612 nt

Origin of reads: Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene39003 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9RNF2_RICCO	-	-	3.00004e-41	51%
FL-Next	sp=Histidine kinase CKI1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	50%
Blast2go	histidine kinase 1	-	-	0.0	64%

Source	ECs	Term	Type	e value	Identity
Blast2go	Histidine kinase.	EC:2.7.13.3	-	0.0	64%
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	0.0	64%

Source	GOs	Term	Type	Identity
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	64%
Blast2go	embryo sac development	GO:0009553	Biological Process	64%
Blast2go	phloem or xylem histogenesis	GO:0010087	Biological Process	64%
Blast2go	secondary growth	GO:0080117	Biological Process	64%
Blast2go	protein histidine kinase activity	GO:0004673	Molecular Function	64%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	64%
Blast2go	protein homodimerization activity	GO:0042803	Molecular Function	64%
Blast2go	cytoplasm	GO:0005737	Cellular Component	64%
Blast2go	nucleus	GO:0005634	Cellular Component	64%
Blast2go	plasma membrane	GO:0005886	Cellular Component	64%

Source	InterPros	Term	Type	Identity
Sma3	Signal transduction response regulator, receiver domain	IPR001789	-	-
Sma3	ATPase-like, ATP-binding domain	IPR003594	-	-
Sma3	Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain	IPR003661	-	-
Sma3	Signal transduction histidine kinase-related protein, C-terminal	IPR004358	-	-
Sma3	Signal transduction histidine kinase, core	IPR005467	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain