SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37989

Length: 638 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene37989 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Prefoldin subunit, putative n=1 Tax=Ricinus communis RepID=B9RZT0_RICCO	-	-	5.0e-25	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	prefoldin subunit 3	-	-	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Prefoldin subunit	IPR004127	-	0.0	-
Sma3	Prefoldin, subunit 3	IPR016655	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
287			33	66	0.997464
288	33	66			0.997464
498	33		66		0.997464
505	66		33		0.997476
508			66	33	0.997476
511	66	33			0.997476
514	66		33		0.997476
521		66		33	0.997476
523	33	66			0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain