SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37920

Length: 401 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene37920
ATGGGCATTGGGAGTCCCTCTGATGACATGGCCCATGACCGCAGATCAAAACTATAATGCCAGGTTATTGGTTGAATATCTTAAGGTTGGTGTAAGGTTTTGTGAAGGTGCCACTACAGTGCCCAACAGGGATGACCTGAGAATTGCAGTTAAGCGAATGTAGCAAGAGAAGGAGAAGAAATGAAAAGAGCAGAGGAGCTAAGCAAGGCCGCTAGAACAGCAGTGCAAGTAGGGGGAACCTCCTACAGGAACATCGAAGCCTGTGTGAGTGAGGTCAAGAAGCTGATCCTGCAGTCTAGTTAATCTCTGAATACCAGAGTAGCAAGCTTAATTTCAAAGCATGATGTCTTTTGCTGATGTTCCTTTCTTGGAATCAAGATAATACATGTGACTGGCTGCCA

Ace file of the UniGene sp_v2.0_unigene37920 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S0A0_RICCO	-	-	1.0e-10	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	anthocyanidin 3-o-glucosyltransferase	-	-	5.77882e-36	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	quercetin 4'-O-glucosyltransferase activity	GO:0080046	Molecular Function	5.77882e-36	75%
Blast2go	quercetin 7-O-glucosyltransferase activity	GO:0080044	Molecular Function	5.77882e-36	75%
Blast2go	quercetin 3-O-glucosyltransferase activity	GO:0080043	Molecular Function	5.77882e-36	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NX38

Fln msg: ERROR#3, very serious frame error, Overlapping hits, possible frame ERROR between 160 and 160, your sequence is shorter than subject: 101 - 468

Fln protein: WALGVPLMTWPMTADQNYNARLLVEYLKVGVRFCEGATTVPNRDDLRIAVKRxxAREGEEMKRAEELSKAARTAVQVGGTSYRNIEACVSEVKKLILQSS*

Protein Length: 102

Fln nts: ATGGGCATTGGGAGTCCCTCTGATGACATGGCCCATGACCGCAGATCAAAACTATAATGCCAGGTTATTGGTTGAATATCTTAAGGTTGGTGTAAGGTTTTGTGAAGGTGCCACTACAGTGCCCAACAGGGATGACCTGAGAATTGCAGTTAAGCGAxxxxxxGCAAGAGAAGGAGAAGAAATGAAAAGAGCAGAGGAGCTAAGCAAGGCCGCTAGAACAGCAGTGCAAGTAGGGGGAACCTCCTACAGGAACATCGAAGCCTGTGTGAGTGAGGTCAAGAAGCTGATCCTGCAGTCTAGTTAATCTCTGAATACCAGAGTAGCAAGCTTAATTTCAAAGCATGATGTCTTTTGCTGATGTTCCTTTCTTGGAATCAAGATAATACATGTGACTGGCTGCCA

Fln Alignment:

AllPineV4_c33435___LGVPLMTWPMTADQNYNARLLVEYLKVGVRFCEGATTVPNRDDLRIAVKRMVAREGEEMKRAEELSKAARTAVQVGGTSYRNIEACVSEVKKLILQSS
A9NX38_______________LGVPLITWPMAADQYYNARLLVEYLKVGVRFCEGATTVPNRDDWRIAVKRLLAREGEEMKRAEELSKAARIAVQEGGTSYRNIEAFVSEIKKLFLQAS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain