SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37281

Length: 213 nt

UniGene Fasta

>sp_v2.0_unigene37281
CGTCGTGACCTTGGCTGTCACTCAAAAAAAGTTGGATGTTGAATTTCTGTGCTCTGTTTTTGTTGAGTGTTTGAGGAAGATTTGGTGGGTATTTTGATTGTTTTGTTGGGATGCCGACGAGATACTGGTGTCATCATTGCCGAAGGTCTGTGAGATTGGAGAGAAGTGGACGCATGGAATGCCCGATCTGTGATGGAGATTTTCAGAGGAAAT

Ace file of the UniGene sp_v2.0_unigene37281

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%

Source	InterPros	Term	Type	Identity
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Domain of unknown function DUF1117	IPR010543	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWK1

Fln msg: Distance to subject end: 344 aas, your sequence is shorter than subject: 34 - 377

Fln protein: MPTRYWCHHCRRSVRLERSGRMECPICDGDFQRK

Protein Length: 35

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAAAAAGTTGGATGTTGAATTTCTGTGCTCTGTTTTTGTTGAGTGTTTGAGGAAGATTTGGTGGGTATTTTGATTGTTTTGTTGGG_-_ATGCCGACGAGATACTGGTGTCATCATTGCCGAAGGTCTGTGAGATTGGAGAGAAGTGGACGCATGGAATGCCCGATCTGTGATGGAGATTTTCAGAGGAAAT

Fln Alignment:

AllPineV4_c32386___MPTRYWCHHCRRSVRLERSGRMECPICDGDF
A9NWK1_______________MPTRYWCHQCRRSVRLER-GRMECPHCDGEF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain