SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37214

Length: 722 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene37214

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PTR2 multi-domain protein	-	-	1.0e-17	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	33%
Blast2go	isoform c	-	-	0.0	67%

Source	GOs	Term	Type	Identity
Blast2go	transport	GO:0006810	Biological Process	67%
Blast2go	proton-dependent oligopeptide secondary active transmembrane transporter activity	GO:0005427	Molecular Function	67%
Blast2go	integral to plasma membrane	GO:0005887	Cellular Component	67%

Source	InterPros	Term	Type	e value	Identity
Sma3	Oligopeptide transporter	IPR000109	-	0.0	-
Sma3	PTR2 family proton/oligopeptide symporter, conserved site	IPR018456	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
235	66		33		0.997452
307		25	50	25	0.995533
332	50		50		1.0
354	50		50		1.0
402		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain