SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene37148

Length: 733 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene37148

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mate efflux domain-containing protein [Arabidopsis thaliana] dbj\|BAB10542.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAK76728.1\| unknown protein [Arabidopsis thaliana] gb\|AAL85047.1\| unknown protein [Arabidopsis thaliana] gb\|AED96215.1\| mate eff	-	-	6.0e-38	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	38%
Blast2go	transparent testa 12	-	-	0.0	76%

Source	InterPros	Term	Type	Identity
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	Ribulose bisphosphate carboxylase, large subunit, C-terminal	IPR000685	-	-
Sma3	Multi antimicrobial extrusion protein	IPR002528	-	-
Sma3		IPR015521	-	-
Sma3	Proteasome assembly chaperone 3	IPR018788	-	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	C %	G %	T %	Probability
481		33	66	0.997467
491		33	66	0.997453
496	66		33	0.997454
530		66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain