SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene36853

Length: 971 nt

Origin of reads: Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene36853

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	plastid transcriptionally active 15 protein [Arabidopsis thaliana] dbj\|BAB11580.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAL91232.1\| unknown protein [Arabidopsis thaliana] gb\|AAN15573.1\| unknown protein [Arabidopsis thaliana] gb\|AED96463.1\| pl	-	-	2.0e-24	28%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	33%
Blast2go	protein	-	-	1.82729e-42	52%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleoid	GO:0009295	Cellular Component	1.82729e-42	52%
Blast2go	plastid	GO:0009536	Cellular Component	1.82729e-42	52%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
554		20		80	0.995493
560		20		80	0.995493
573	20		80		0.995493
574		20	80		0.995493
577	80			20	0.995493
583	50			50	1.0
746	66		33		0.997452
751	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain