SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene36688

Length: 780 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene36688

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	46%
Blast2go	protein misato homolog 1-like	-	-	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	63%
Blast2go	cytosol	GO:0005829	Cellular Component	0.0	63%

Source	InterPros	Term	Type	Identity
Sma3	HMG-I/HMG-Y, DNA-binding, conserved site	IPR000637	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	AT hook, DNA-binding motif	IPR017956	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3		IPR019782	-	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
314	66	33			0.997452
315			33	66	0.997452
318	66		33		0.997452
319	66			33	0.997452
320	66		33		0.997452
321	33			66	0.997452
323		33		66	0.997457
327		66	33		0.997453
329	66			33	0.997452
330		66	33		0.997452
335		33	66		0.997452
337		33	66		0.997452
338	33	66			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain