SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene36365

Length: 675 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene36365

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	chaperone DnaJ-domain containing protein [Arabidopsis thaliana] dbj\|BAB09472.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAM13185.1\| unknown protein [Arabidopsis thaliana] gb\|AAO30049.1\| unknown protein [Arabidopsis thaliana] gb\|AED92512.1\| chape	-	-	3.0e-20	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Blast2go	chaperone protein	-	-	2.94522e-25	76%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, cysteine-rich domain	IPR001305	-	-
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Chaperone DnaJ, C-terminal	IPR002939	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3	Chaperone DnaJ	IPR012724	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
8		33	66		0.997476
14			33	66	0.997454
271		75	25		0.996473
325	16		83		0.994512
328		83	16		0.994512
329	83		16		0.994512
403		12		87	0.992554
404	12		87		0.992554
405	12	87			0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain