SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene36352

Length: 843 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene36352

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Potassium channel AKT1; Short=OsAKT1	-	-	2.0e-37	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	potassium channel akt1	-	-	0.0	56%

Source	GOs	Term	Type	Identity
Blast2go	ion transport	GO:0006811	Biological Process	56%
Blast2go	pollen tube growth	GO:0009860	Biological Process	56%
Blast2go	binding	GO:0005488	Molecular Function	56%
Blast2go	inward rectifier potassium channel activity	GO:0005242	Molecular Function	56%

Source	InterPros	Term	Type	Identity
Sma3	Cyclic nucleotide-binding domain	IPR000595	-	-
Sma3	Potassium channel, voltage-dependent, EAG/ELK/ERG	IPR003938	-	-
Sma3	Ion transport	IPR005821	-	-
Sma3	RmlC-like jelly roll fold	IPR014710	-	-
Sma3	Cyclic nucleotide-binding, conserved site	IPR018488	-	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
420		75	25		0.996473
422		75	25		0.996473
426			75	25	0.996473
562	85		14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain