SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35839

Length: 810 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene35839

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative 60S ribosomal protein L35 [Rheum australe]	-	-	6.0e-33	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	60s ribosomal protein l35	-	-	1.4013e-44	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	1.4013e-44	90%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L29	IPR001854	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 32)

Position	A %	C %	G %	T %	Probability
326	57		28	14	1.0
328	14		14		0.984337
329	85	14			0.993533
332	14	85			0.993533
334		85	14		0.993533
335	14		85		0.993533
349			85	14	0.993533
350	14	85			0.993533
351	14	85			0.993533
359	75		12	12	0.975346
363	12	75			0.975346
364	12	87			0.992554
450	87		12		0.992554
458	85	14			0.993533
459		14		85	0.993533
478		85		14	0.993533
486		83		16	0.994512
551		71	28		1.0
568	33		66		1.0
573	33		66		1.0
580	33		66		1.0
589	66		33		1.0
600		33		66	1.0
605	16		66		0.988813
607	83		16		0.994512
627	66		33		1.0
631		60		40	1.0
641		40		60	1.0
651		40		60	1.0
660			40	60	1.0
737	66		33		0.997452
743	33		66		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain