SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35820

Length: 587 nt

Origin of reads: Biogeco1 v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene35820 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mitochondrial inner membrane protease subunit 2 [Arabidopsis thaliana] gb\|AAD56314.1\|AC009326_1 putative signal peptidase [Arabidopsis thaliana] gb\|AAF07842.1\|AC010871_18 putative mitochondrial inner membrane protease subunit 2 [Arabidopsis thaliana] gb\|A	-	-	3.0e-17	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	mitochondrial inner membrane protease subunit 2	-	-	0.0	67%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S26A, signal peptidase I	IPR000223	-	-
Sma3	Peptidase S24/S26A/S26B/S26C, beta-ribbon domain	IPR011056	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-
Sma3	Peptidase S26A, signal peptidase I, lysine active site	IPR019757	-	-
Sma3	Peptidase S24/S26A/S26B	IPR019759	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
419			16	83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain