SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35532

Length: 1113 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene35532

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF581 domain containing protein	-	-	1.0e-23	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	protein	-	-	8.61835e-14	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF581	IPR007650	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
310	33		66		0.997452
376			33	66	0.997452
431		75	25		0.996473
432	75		25		0.996473
433			25	75	0.996473
620			33	66	0.997452
798	66		33		0.997453
809	33	66			0.997454
879		50		50	1.0
891			50	50	1.0
925		25		25	0.995534
926		75		25	0.996474
927		75		25	0.99649
929		33		66	0.997452
933		33		66	0.997464
934	66	33			0.997456
942	66	33			0.997476
964	66		33		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain