SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene35081

Length: 837 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene35081

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb\|AAL60010.1\| unknown protein [Arabidopsis thaliana] gb\|AAM91809.1\| unknown protein [Arabidopsis thaliana] gb\|AEE29694.1\| ketose-bisphosphate aldolase class-II-like protein [Arabid	-	-	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	30%
Blast2go	ketose-bisphosphate aldolase class-ii-like protein	-	-	73%

Source	GOs	Term	Type	Identity
Blast2go	primary metabolic process	GO:0044238	Biological Process	73%
Blast2go	cellular metabolic process	GO:0044237	Biological Process	73%
Blast2go	catalytic activity	GO:0003824	Molecular Function	73%
Blast2go	nucleus	GO:0005634	Cellular Component	73%

Source	InterPros	Term	Type	Identity
Sma3	Ketose-bisphosphate aldolase, class-II	IPR000771	-	-
Sma3	3-hydroxyisobutyrate dehydrogenase-related, conserved site	IPR002204	-	-
Sma3	6-phosphogluconate dehydrogenase, NADP-binding	IPR006115	-	-
Sma3	Dehydrogenase, multihelical	IPR013328	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-
Sma3	3-hydroxyacid dehydrogenase/reductase	IPR015815	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
93			80	20	0.995498
98			20	80	0.995494
99			20	80	0.995494
134	62		37		1.0
135	62			37	1.0
141	37		62		1.0
142		37	62		1.0
143		37		62	1.0
146		57	42		1.0
147	57		42		1.0
148		42		57	1.0
152		42	57		1.0
157	85	14			0.993533
386		12		87	0.992554
387	87			12	0.992554
390	12			87	0.992554
394	12			87	0.992554
398	12			87	0.992554
402	87	12			0.992554
403		12	87		0.992554
502	33		66		0.997476
544	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain