SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34996

Length: 888 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene34996 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	serine/threonine-protein kinase-like protein [Arabidopsis thaliana]	-	-	1.0e-27	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	30%
Blast2go	calcium calmodulin-dependent protein kinase kinase	-	-	2.05339e-35	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	2.05339e-35	67%
Blast2go	kinase activity	GO:0016301	Molecular Function	2.05339e-35	67%

Source	InterPros	Term	Type	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Phosphoinositide 3-kinase, accessory (PIK) domain	IPR001263	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Phosphatidylinositol Kinase	IPR015433	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Phosphatidylinositol 3/4-kinase, conserved site	IPR018936	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
600	16			83	0.994512
601	16		83		0.994512
602		83		16	0.994512
603		83	16		0.994512
604	83			16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain