SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34791

Length: 718 nt

Origin of reads: Biogeco1 v2 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene34791 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like	-	-	3.0e-18	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	uvrb uvrc motif-containing protein	-	-	0.0	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	70%

Source	InterPros	Term	Type	Identity
Sma3	UVR domain	IPR001943	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Hemimethylated DNA-binding domain	IPR011722	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	DNA ligase, ATP-dependent, conserved site	IPR016059	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain