SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34771

Length: 1895 nt

Origin of reads: Inia v1 Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene34771 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Xenotropic and polytropic murine leukemia virus receptor ids-4, putative n=1 Tax=Ricinus communis RepID=B9SES9_RICCO	-	-	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	spx domain-containing protein 2	-	-	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular response to phosphate starvation	GO:0016036	Biological Process	0.0	61%
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	SPX, N-terminal	IPR004331	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LNU0

Fln msg: your sequence is longer than subject: 353 - 238

Fln protein: MKFGKRLKSQIEDTLPKWRDKFLAYKYLKKLVNSMSTAREASPSSGSDEIRGGSDERPNKRQKVSAGPVEAGAASDDYLPAFVIDFECNKRKMTAEESDFVDLLNAEIDKFNSFFMEQEEEYIIRQKELQDRIERLKSNSRQKGAVFSETEYNEEMIKLRKDIVNFHGEMVLLENYSALNYTGIAKILKKYDKRTGGLLRHPFIQKVLQQPFFTTEQLSKLIRECENTLQSLFPDYPQSILQVPASPSSNGNHIETSASTGKSDSQRLRVPLAATTKEEFGEENALFKGRGDEDGDCDAEGMESIYRSTMAALRTMKEIRRGSSTYSVFSLPPLDETKSMPLCSLIPICPKN*

Protein Length: 354

Fln nts: GAGATCTGAGCTTGGCATATTCTGAGATATATTCTGAGAATATTACGATGATCCGGTAGTTTGCGTCCACATTAAATGCTGCGACTTGTCTGAACATAAAGTGCTATTTAATCCACCCTCGCCTCCAATTTTTCCTGGCAAACTACTGAACTTGTGACCAATTTTATGATTCTTGTTTGCTCTTTAATGTGAGCCCATGGTTTTTGCAGCTACAGTTTGTACTCTGAGGAAATTCCACTGGTTTTGGGGTTTCGACACTTATGACGATTCGAACTCGTGACCTTAGCGCGTCGTGACCTTGGtTGGAcTATTTGGCTTTGGCGATGGATTTAGATCTTTAAATCTCCGTTTCTTGACTCTTGACGCTAGACAGCTATTTTCTTTGGTATTCTGGTTCCTTAGGCGGAAATGACTTCTTCTGGCCAAATGGAAACATTTCTCAGGCAGTGAGGCCTGCGGTATTATTGTAATTTGCAGAGTATAATTCTTTTGGGAGGAGGAGAACTCTTTGGCACTGAGATC_-_ATGAAGTTTGGCAAAAGATTGAAGAGTCAGATCGAGGATACATTGCCAAAATGGCGAGATAAGTTCCTGGCTTATAAATACTTGAAGAAGCTCGTCAATTCTATGTCTACTGCAAGGGAGGCTTCGCCTTCCTCTGGTAGCGATGAGATCCGGGGCGGTTCCGATGAACGTCCCAACAAAAGGCAAAAGGTCTCTGCCGGACCTGTTGAAGCAGGCGCTGCTTCAGATGACTATCTACCCGCCTTTGTTATAGATTTCGAATGCAATAAGCGAAAAATGACTGCGGAGGAGTCTGACTTCGTTGATTTGCTGAATGCTGAGATCGACAAGTTTAATTCCTTCTTTATGGAGCAAGAAGAAGAATACATCATCCGTCAGAAGGAGCTGCAGGACAGGATCGAAAGGTTGAAGAGCAACAGTAGACAGAAGGGGGCAGTTTTCTCTGAAACCGAGTACAACGAAGAAATGATCAAATTGAGGAAAGACATTGTGAATTTTCATGGCGAGATGGTTCTGCTCGAGAATTACAGCGCTCTCAACTATACAGGGATTGCGAAGATTTTGAAGAAATATGACAAGAGAACGGGCGGGTTACTGCGCCATCCCTTCATTCAGAAGGTTCTGCAACAACCCTTTTTCACCACTGAACAACTCTCTAAGCTCATCAGAGAATGTGAGAACACACTCCAAAGTTTATTTCCAGATTACCCTCAAAGCATTCTTCAAGTACCTGCAAGTCCGTCCAGCAATGGAAACCATATAGAAACATCTGCTTCTACTGGTAAAAGCGATTCGCAGAGGCTACGAGTACCGCTGGCGGCAACGACCAAAGAGGAATTTGGGGAGGAGAATGCATTGTTTAAAGGCAGGGGGGATGAGGATGGGGATTGTGATGCGGAAGGTATGGAAAGCATATACAGAAGCACCATGGCTGCGCTACGGACCATGAAAGAAATACGCAGAGGGAGCTCTACCTACAGTGTCTTTTCCTTGCCCCCTTTGGATGAGACCAAATCTATGCCGCTCTGTTCTCTCATCCCCATCTGCCCCAAAAACTAA___TACTCCCTCCAAGTCCCTATAGGCTAACACACTATTCTTGCATAAAAAATACAGAAATCTATAGAAATTAGTTTAAGGTATATGTAAGTTCGTCTACAGATGGAAGCTCTTGATCTCTCAGTGTTCTGCAAGTTGCAAGAAATATGAAATTTGTAATATCCATGCAGAATTATTTTCAAATTTCAGAGTTGAGCTTAACGTATAAGCTCTACGTTGTCCACCCCTCCTGTTACCATTCCTAAGGAGATAAAGTACAGTGTAGTTTTGATGTCTTCTTTTCTTGATTGGTGCACAATTTTAGCAAAATTTTACTT

Fln Alignment:

AllPineV4_c24861___MEQEEEYIIRQKELQDRIERLKSNSRQKGAVFSETEYNEEMIKLRKDIVNFHGEMVLLENYSALNYTGIAKILKKYDKRTGGLLRHPFIQKVLQQPFFTTEQLSKLIRECENTLQSLFPDYPQSILQVPASPSSNGNHIETSASTGKSDSQRLR-VPLAATTKEEFGEENALFKGRGDEDGDCDAEGMESIYRSTMAALRTMKEIRRGSSTYSVFSLPPLDETKSMPLCSLIPICPKN
B8LNU0_______________MEQEEEYIIRQKELQDRIEKLKSNSRQNATVFSQTEYNEEMIKLRKDIVNFHGEMVLLENYSALNYTGLAKILKKYDKRTGGLLRHPFIQKVLQQPFFTTEQLSKLISECENTLQSLFPDYPKSLLQVPAGPSSNGNQAEASSSAGNSDLQRLREPPPAATTQAEFGEENSPLKGKGDEDGDRDAEGMESIYRSTMAALRTMREIRRGSSTYSVFSLPPLDETKSIPLCSLIPICPKN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain