SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34240

Length: 452 nt

Origin of reads: Uma v2

UniGene Fasta

>sp_v2.0_unigene34240
AAATATCGGCAAAATCAGCCGTCAGTAGAGTTGTAGCGTTGGGGACAGTGTGTGCAATTGAACTCAAAGCTGATAACGCCGACATTGGTTATGGCTCATTGTTAGCAAGTTCAATTGTTCAGAAGCTTCGCAATGATGGTGTTTACCTGCTGTCTCTTGGGAATGTTATATATCTCATGTGTGGACCAGCTACACCAGCAACAGTTTGTTCTACAATATTGGATAAAGTGTGCCAGAGGCTTGATGAATGCTAATTTTTCAGAGAACTGTTCGGAATAAATGAAGAGTTCCTGTGTTAGTATGTATATTATCAATTTTGAAAGGAATTCATGAGCAGAGTAGTAGGCCATTTGACATTAAATTTTCTTCTCTATCGTGATCATCGTATAGTGATGGTAATTATTCTTCCAAAGATTTAATGAAAATCATAGTAATTGCAACAATTATACGAA

Ace file of the UniGene sp_v2.0_unigene34240

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein [Arabidopsis thaliana] gb\|ABN80998.1\| DAPA aminotransferase [Arabidopsis thaliana] gb\|ABU50829.1\| dethiobiotin synthetase [Arabidopsis thaliana]	-	-	6.0e-17	53%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	59%
Blast2go	adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein	-	-	1.33213e-22	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenosylmethionine--8-amino-7-oxononanoate transaminase.	EC:2.6.1.62	-	1.33213e-22	72%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Biotin metabolism	00780		1.33213e-22	72%
Blast2go	Metabolic pathways	01100		1.33213e-22	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	biotin biosynthetic process	GO:0009102	Biological Process	1.33213e-22	72%
Blast2go	adenosylmethionine-8-amino-7-oxononanoate transaminase activity	GO:0004015	Molecular Function	1.33213e-22	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Aminotransferase class-III	IPR005814	-	0.0	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: A5B4K4

Fln msg: your sequence is shorter than subject: 84 - 351

Fln protein: ISAKSAVSRVVALGTVCAIELKADNADIGYGSLLASSIVQKLRNDGVYLLSLGNVIYLMCGPATPATVCSTILDKVCQRLDEC*

Protein Length: 85

Fln nts: AAATATCGGCAAAATCAGCCGTCAGTAGAGTTGTAGCGTTGGGGACAGTGTGTGCAATTGAACTCAAAGCTGATAACGCCGACATTGGTTATGGCTCATTGTTAGCAAGTTCAATTGTTCAGAAGCTTCGCAATGATGGTGTTTACCTGCTGTCTCTTGGGAATGTTATATATCTCATGTGTGGACCAGCTACACCAGCAACAGTTTGTTCTACAATATTGGATAAAGTGTGCCAGAGGCTTGATGAATGCTAA___TTTTTCAGAGAACTGTTCGGAATAAATGAAGAGTTCCTGTGTTAGTATGTATATTATCAATTTTGAAAGGAATTCATGAGCAGAGTAGTAGGCCATTTGACATTAAATTTTCTTCTCTATCGTGATCATCGTATAGTGATGGTAATTATTCTTCCAAAGATTTAATGAAAATCATAGTAATTGCAACAATTATACGAA

Fln Alignment:

AllPineV4_c23411___ISAKSAVSRVVALGTVCAIELKADNADIGYGSLLASSIVQKLRNDGVYLLSLGNVIYLMCGPATPATVCSTILDKVCQRLDE
A5B4K4_______________ISSHPAVQRVVALGTLFALELQAEGSNVGYGSLYARSLLLKLRXDGVYLRPLGNVIYLMCGPCTSPETCSQLLIKLYRRLEE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain