SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34191

Length: 618 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene34191

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	WS02751.C21_I08 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02751_I08 5, mRNA sequence.	-	-	89%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	acetyl-coenzyme a synthetase	-	-	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	auxin metabolic process	GO:0009850	Biological Process	0.0	67%
Blast2go	peroxisome	GO:0005777	Cellular Component	0.0	67%

Source	InterPros	Term	Type	e value	Identity
Sma3	AMP-dependent synthetase/ligase	IPR000873	-	0.0	-
Sma3	Mediator complex, subunit Med13	IPR009401	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
270	80			20	0.995493
271	80	20			0.995493
273	20		80		0.995493
279		20		80	0.995493
285			80	20	0.995493
290		20		80	0.995493
295	25		75		0.996473
344		60		40	1.0
345	20	80			0.995493
398		25	75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain