SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene34166

Length: 712 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene34166

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative prolyl 4-hydroxylase, alpha subunit n=1 Tax=Cryptomeria japonica RepID=Q1XG55_CRYJA	-	-	2.0e-31	84%
FL-Next	tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	0.0	84%
Blast2go	prolyl 4-hydroxylase alpha-2 subunit	-	-	3.2335e-31	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	3.2335e-31	87%

Source	InterPros	Term	Type	e value	Identity
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	-
Sma3	Prolyl 4-hydroxylase, alpha subunit	IPR006620	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 44)

Position	A %	C %	G %	T %	Probability
143	66		33		0.997452
147	66			33	0.997452
295		60		40	1.0
297		60	40		1.0
303	60			40	1.0
304	60			40	1.0
327		80		20	0.995493
329			20	80	0.995493
332	80		20		0.995493
334	80	20			0.995493
335	80	20			0.995493
337	80			20	0.995493
341	80			20	0.995493
343	80			20	0.995493
344		20	80		0.995493
345	20			80	0.995493
346		20	80		0.995493
347	80			20	0.995493
348	80	20			0.995493
349	20		80		0.995493
378	83		16		0.994512
379		83		16	0.994512
380			16	83	0.994512
383		16	83		0.994512
386			16	83	0.994512
389		83		16	0.994512
390	83		16		0.994512
391	83			16	0.994512
393	16			83	0.994512
396			83	16	0.994512
397		16	83		0.994512
398	16			83	0.994512
404		14		85	0.993533
407		14		85	0.993533
410	85		14		0.993533
412		14		85	0.993533
413	85	14			0.993533
414			85	14	0.993533
416			14	85	0.993533
422	85			14	0.993533
423		14	85		0.993533
425	85	14			0.993533
427		14	85		0.993533
645		25		50	0.995533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain