SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene33888

Length: 790 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene33888

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thaliana] dbj\|BAA97055.1\| unnamed protein product [Arabidopsis thaliana] gb\|AEE75588.1\| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thali	-	-	3.0e-38	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine amidase a-like	-	-	0.0	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	59%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	59%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
399	33	66			0.997452
403			33	66	0.997459
405	66		33		0.997461
575	20		80		0.995493
652	50	50			1.0
712		25	75		0.996473
715			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain