SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene33191

Length: 976 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene33191

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	lecithine cholesterol acyltransferase-like protein [Medicago truncatula]	-	-	1.0e-24	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	lecithin-cholesterol acyltransferase-like 1	-	-	1.78369e-27	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	1.78369e-27	69%

Source	InterPros	Term	Type	e value	Identity
Sma3	Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase	IPR003386	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
541			85	14	0.993533
571	42	57			1.0
598		12	87		0.992554
599	87		12		0.992554
601		12		87	0.992554
605	12		87		0.992554
606		12	87		0.992554
607		12		87	0.992554
612			12	87	0.992554
613	87	12			0.992554
615			12	87	0.992554
620		12	87		0.992554
629	14		85		0.993533
658		42		57	1.0
769		80		20	0.999996
789			80	20	0.999996
814		20		60	0.999999
836		20		80	0.999996
838		80		20	0.999996
846	11	88			0.923564
858		11	88		0.923564
897			20	80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain