SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene32322

Length: 432 nt

UniGene Fasta

>sp_v2.0_unigene32322
GGAATTGGGTCGTGGCTCCACTCTGGGGTTTCTCCCAACAACATTGTCATGGGAATGCCGCTCTACGGGCGTTCCTGGATACTGAAAGGCCTGGACGAGACGGGGATTGGAGCCCCTGCGATGGCTGCTGGTCCCAAGCAAACCCTAAGCAACGAAAAGGGGGTGATGTTCTTCTCCGAGATCAGAGACTTGATAAATCAGAAGAACGCAACAGAGGTCTTCGACAAGGATACCGTATCGGCCTACTCCTACTCATCAGACATGATCTGGGTTGGGTACGACAACCCAGATTCCGTGGCAATAAAGGTTTCGTTCGCCAAAGAGAGGCGTCTGTTGGGTTATTTCTTCTGGGCTATCAGTCAAGATAGCAACTGGATGCTTTCCACCCAAGCTTTCCAGTCGTGGGAAAAAGTACGATGAGCTACACTTTCT

Ace file of the UniGene sp_v2.0_unigene32322

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chitinase A n=1 Tax=Cycas revoluta RepID=Q4W6L6_CYCRE	-	-	5.0e-31	51%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	47%
Blast2go	protein	-	-	1.50037e-37	63%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 18, catalytic domain	IPR001223	-	-
Sma3	Glycoside hydrolase, chitinase active site	IPR001579	-	-
Sma3	Chitinase II	IPR011583	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9NIJ0

Fln msg: your sequence is shorter than subject: 140 - 163

Fln protein: GIGSWLHSGVSPNNIVMGMPLYGRSWILKGLDETGIGAPAMAAGPKQTLSNEKGVMFFSEIRDLINQKNATEVFDKDTVSAYSYSSDMIWVGYDNPDSVAIKVSFAKERRLLGYFFWAISQDSNWMLSTQAFQSWEKVR*

Protein Length: 141

Fln nts: GGAATTGGGTCGTGGCTCCACTCTGGGGTTTCTCCCAACAACATTGTCATGGGAATGCCGCTCTACGGGCGTTCCTGGATACTGAAAGGCCTGGACGAGACGGGGATTGGAGCCCCTGCGATGGCTGCTGGTCCCAAGCAAACCCTAAGCAACGAAAAGGGGGTGATGTTCTTCTCCGAGATCAGAGACTTGATAAATCAGAAGAACGCAACAGAGGTCTTCGACAAGGATACCGTATCGGCCTACTCCTACTCATCAGACATGATCTGGGTTGGGTACGACAACCCAGATTCCGTGGCAATAAAGGTTTCGTTCGCCAAAGAGAGGCGTCTGTTGGGTTATTTCTTCTGGGCTATCAGTCAAGATAGCAACTGGATGCTTTCCACCCAAGCTTTCCAGTCGTGGGAAAAAGTACGATGA___GCTACACTTTCT

Fln Alignment:

AllPineV4_c17007___GIGSWLHSGVSPNNIVMGMPLYGRSWILKGLDETGIGAPAMAAGPKQTLSNEKGVMFFSEIRDLINQKNATEVFDKDTVSAYSYSSDMIWVGYDNPDSVAIKVSFAKERRLLGYFFWAISQDSNWMLSTQAFQSW
B9NIJ0_______________GLTSWVRAGVPRNMVVMGLPLYGRTWQLKDPKVNGIGAPATAAGP-----GDDGVLIFSQVEKFNKENGATVVYDAKTVSTYSYAGTS-WIGYDDSRSTTVKLKFAQALGLRGYFFWALSYDSEWEISKQASRAW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain