SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene32162

Length: 813 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene32162

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO	-	-	9.80909e-45	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	f-box family protein	-	-	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	Thiolase	IPR002155	-	-
Sma3	Hydroxymethylglutaryl-CoA reductase, class I/II	IPR002202	-	-
Sma3	Zinc finger, Dof-type	IPR003851	-	-
Sma3		IPR012335	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3	Tubulin, conserved site	IPR017975	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
642		90		10	0.90298
731	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain