SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene31654

Length: 1200 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene31654

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphatidylinositol/phosphatidylglycerol transfer protein domain-containing protein [Arabidopsis thaliana] dbj\|BAB11397.1\| unnamed protein product [Arabidopsis thaliana] gb\|ABG48457.1\| At5g06480 [Arabidopsis thaliana] gb\|AED91022.1\| phosphatidylinositol/	-	-	7.0e-29	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	phosphatidylglycerol phosphatidylinositol transfer protein	-	-	0.0	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	0.0	69%

Source	InterPros	Term	Type	e value	Identity
Sma3	MD-2-related lipid-recognition	IPR003172	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
840		12		87	0.992554
841	75		25		1.0
843		25		75	1.0
844	12			75	0.975346
845		12	87		0.992554
846			75	25	1.0
847	75	12			0.975346
848	87		12		0.992554
851	87	12			0.992554
854			12	87	0.992554
855			12	87	0.992554
858	87			12	0.992554
859	87		12		0.992554
862		12	87		0.992554
863	12		87		0.992554
864	87	12			0.992554
866		12		87	0.992554
867	12			87	0.992554
993	16		83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain