SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene30775

Length: 1370 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene30775

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Steroid sulfotransferase, putative n=3 Tax=Arabidopsis RepID=Q8LEH6_ARATH	-	-	8.00001e-42	35%
FL-Next	sp=Flavonol sulfotransferase-like; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	37%
Blast2go	protein	-	-	0.0	53%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring sulfur-containing groups, Sulfotransferases.	EC:2.8.2.-	-	0.0	53%

Source	KEGGs	Term	Identity
Blast2go	Tryptophan metabolism	00380	53%
Blast2go	Various types of N-glycan biosynthesis	00513	53%
Blast2go	Other types of O-glycan biosynthesis	00514	53%
Blast2go	Glycosaminoglycan biosynthesis - chondroitin sulfate	00532	53%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	53%
Blast2go	Glycosaminoglycan biosynthesis - heparan sulfate	00534	53%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	53%
Blast2go	Glucosinolate biosynthesis	00966	53%
Blast2go	Biosynthesis of secondary metabolites	01110	53%

Source	GOs	Term	Type	e value	Identity
Blast2go	sulfotransferase activity	GO:0008146	Molecular Function	0.0	53%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: P52839

Fln msg:

Fln protein: MAAVEEESTMELKNSSSTDLIASCGMRYQKCEGFWIQVNTIPAVKVLQREFQPLPDDIFLASLPKTGTTWCKALLHTIVQFCKEDTNFGASVEDRNPHSLVRTMETRLSHSTAEHEQCDVSIFSKFPSPRVLHTHLPFSLLPPPVRSSACKIVYIARNPRDVCVSRWKFFNKLHEHGLSFSDGDLSKEAMFGGFCSGFFHGGPFAESVLSYWRESRRDPNKVMFVTYEDLQADCVGCVKKLGLFLGCSPQLVEENAAIIVEKCSFQSLSTLEVNKTGRVLENRFGTPNHAYFRDGKVGEWKKHFTPQMEERFYWRSSRN*

Protein Length: 321

Fln nts: TTGTCTTCGTAGATCAACAAGGACACGACTCTCACTTTCTATTACCTTCAACGGTAATCATTGCTCGTAGTGGAGTCGTTTGCCAGTTGTGAACAGCACCAGCAGCAAGAGGAGGGCGAGGTC_-_ATGGCGGCGGTAGAAGAAGAATCGACTATGGAATTGAAAAATTCGTCATCCACTGACCTCATTGCGTCCTGCGGGATGAGGTACCAGAAGTGTGAAGGGTTTTGGATACAGGTCAACACAATACCAGCAGTGAAGGTTTTGCAAAGGGAATTCCAACCGCTCCCGGACGACATTTTCTTGGCTTCATTACCAAAAACGGGGACAACATGGTGTAAAGCATTGCTTCACACCATCGTCCAATTTTGCAAAGAAGACACGAATTTCGGGGCTTCTGTGGAAGACCGAAATCCCCATTCTTTGGTACGCACCATGGAAACACGCCTCTCCCATTCTACTGCTGAGCATGAACAGTGCGATGTTTCCATCTTTTCAAAGTTTCCATCGCCGCGTGTGCTGCACACCCATTTGCCATTCAGTTTGCTGCCTCCTCCTGTGAGGTCTTCTGCTTGTAAGATTGTTTACATTGCTCGAAACCCCAGGGATGTCTGCGTTTCCCGTTGGAAATTCTTCAATAAACTCCATGAACACGGGTTATCTTTTTCAGATGGAGATTTAAGCAAGGAAGCTATGTTTGGTGGGTTTTGCTCTGGATTTTTCCATGGCGGCCCGTTTGCAGAAAGCGTCCTGAGTTATTGGCGTGAAAGCAGACGGGATCCTAATAAGGTGATGTTTGTTACTTACGAGGACCTGCAAGCCGATTGCGTGGGTTGCGTTAAAAAGCTTGGCCTTTTCTTGGGATGCTCTCCTCAACTGGTGGAGGAGAACGCTGCAATAATTGTGGAGAAGTGCAGTTTCCAGAGCCTGTCAACATTGGAGGTGAATAAAACGGGAAGAGTGTTGGAAAATAGATTTGGAACGCCCAACCACGCTTACTTCAGAGATGGAAAAGTTGGCGAGTGGAAGAAGCATTTCACGCCACAGATGGAGGAGCGTTTTTATTGGAGATCGAGCAGAAATTGA___ACAACGAAGGCCTCCATTTCAAATACAGTTTATAGAAAGCCATTACATTACCGATCCATTTTCGTTATTAGATAAGAGCTAAGTGGTGCTGAATGTTATTATATTACTGTCGAGTCTGCTACAGTGGGTTGGTGAAGTTGTTTCTAATTGCCTCGGTTAGGTTTGGTGCGTTTGAAGGTGTTTATAATTGTGTGGGTTAAGTTTGAATATTTATGAAAATATTAGGTTGTATTTGTTCTAATTGTGAAACGGGAAAAACTTTAAAAGTTTTAGAATATTTATTAAAA

Fln Alignment:

AllPineV4_c13461___EGFWIQVNTIPAVKVLQREFQPLPDDIFLASLPKTGTTWCKALLHTIVQFCKEDTNFGAS--VEDRNPHSLVRTMETRLSHSTAEHEQCDVSIFSKFPSPRVLHTHLPFSLLPPPVRSSACKIVYIARNPRDVCVSRWKFFNKLHEHGLSFSDGDLSKEAMXXXXXXXXXXXXXXAESVLSYWRESRRDPNKVMFVTYEDLQADCVGCVKKLGLFLGCSPQLVEENAAIIVEKCSFQSLSTLEVNKTGRVLENRFGTPNHAYFRDGKVGEWKKHFTPQMEE
P52839_______________QGLWHTQAILQGILICQKRFEAKDSDIILVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEG------VYYESPDFD-FSSLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPE----ETADYPIEKAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECG-FIEEEEVREIVKLCSFESLSNLEVNKEGKLPN---GIETKTFFRKGEIGGWRDTLSESLAE

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
304		33		66	0.997452
367			25	75	0.996478
384	50	50			1.0
403	33		66		0.997452
406	66		33		0.997453
423	50	50			1.0
432		50	50		1.0
447	50		50		1.0
452		50		50	1.0
453		60		40	1.0
473		40	60		1.0
477	60			40	1.0
480	40		60		1.0
493		60		40	1.0
499	66	33			1.0
550	16		83		0.994512
555		83		16	0.994512
557		83		16	0.994512
571		16		83	0.994512
958			62	37	1.0
1331		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain