SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene30733

Length: 656 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene30733

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Choline/ethanolamine kinase, putative n=1 Tax=Ricinus communis RepID=B9SED6_RICCO	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	72%
Blast2go	choline ethanolamine	-	-	72%

Source	InterPros	Term	Type	Identity
Sma3	Choline/ethanolamine kinase	IPR002573	-	-
Sma3	Aminoglycoside phosphotransferase	IPR002575	-	-
Sma3	Choline kinase, N-terminal	IPR007521	-	-

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
362		50		50	1.0
406		85		14	0.993533
414	14		85		0.993533
428		14	85		0.993533
443		14		85	0.993533
445	85			14	0.993533
450	71		28		1.0
497	33		66		1.0
522		60		40	1.0
539			20	80	0.995493
541			20	80	0.995493
542			80	20	0.995493
546			80	20	0.995493
547		20		80	0.995493
549		80		20	0.995493
550		80	20		0.995493
552	20		80		0.995493
553	20			80	0.995493
560		33		66	0.997452
563	33		66		0.997452
566	33		66		0.997452
567	33	66			0.997452
571	33	33			0.997753
572			66	33	0.997452
574		33		66	0.997452
575	66			33	0.997452
580	66			33	0.997452
581	66			33	0.997452
582	66	33			0.997452
586		33		66	0.997471
587			33	66	0.997471

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain