SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene30343

Length: 1027 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene30343

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Gb\|AAF64534.1 n=3 Tax=Arabidopsis RepID=Q9FHA6_ARATH	-	-	1.0e-13	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	protein	-	-	0.0	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Rapid ALkalinization Factor	IPR008801	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
34		66		33	0.997461
36		66		33	0.997461
74		50	50		1.0
115		16	83		0.994513
218	20	80			0.995493
219	16			83	0.994512
220			16	83	0.994512
221		66	33		1.0
222	66		33		1.0
223		66	33		1.0
243	70		30		1.0
244		9	72	18	0.999994
284		66		33	1.0
298		66	33		1.0
302	66		33		1.0
310	10			90	0.90298
335		11	88		0.923564
338		88		11	0.923564
339	62		37		1.0
342	14			85	0.993533
343		14		85	0.993533
344	16	83			0.994512
346			83	16	0.994512
540	33		66		0.997452
685			88	11	0.991528
686	11	88			0.991528
687	11	88			0.991528
688		88	11		0.991528
689	11		88		0.991528
755	87			12	0.992554
958		16		83	0.994512
959		16		83	0.994512
993	50			50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain