SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene28936

Length: 884 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene28936

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	sp=Probable LRR receptor-like serine/threonine-protein kinase At2g16250; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	45%
Blast2go	protein	-	-	1.06947e-41	68%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
597	20			80	0.995497
600			20	80	0.995493
601	75		25		0.996473
627	16			83	0.994513
697		20		80	0.995493
712	80		20		0.995493
714		20		80	0.995493
765	25		75		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain