SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene28787

Length: 918 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene28787

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=4 Tax=Nicotiana RepID=RPO2B_TOBAC	-	-	1.4013e-45	55%
FL-Next	sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco).	-	-	0.0	55%
Blast2go	phage-type rna polymerase	-	-	0.0	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastid	GO:0009536	Cellular Component	0.0	72%
Blast2go	mitochondrion	GO:0005739	Cellular Component	0.0	72%

Source	InterPros	Term	Type	Identity
Sma3	DNA-directed RNA polymerase, phage-type	IPR002092	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
549	66		33		1.0
669			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain