SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene28187

Length: 1867 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene28187

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glutathione synthetase, chloroplastic n=2 Tax=Brassica RepID=GSHB_BRAJU	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	glutathione synthetase	-	-	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	binding	GO:0005488	Molecular Function	0.0	77%

Source	InterPros	Term	Type	Identity
Sma3	F-box domain, cyclin-like	IPR001810	-	-
Sma3	Glutathione synthase, substrate-binding, eukaryotic	IPR004887	-	-
Sma3	Glutathione synthase, eukaryotic	IPR005615	-	-
Sma3	ATP-grasp fold, subdomain 2	IPR013816	-	-
Sma3	Glutathione synthase, alpha-helical, eukaryotic	IPR014042	-	-
Sma3	Glutathione synthase, C-terminal, eukaryotic	IPR014709	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5A8U7

Fln msg:

Fln protein: MPFNFISFSRHKKIQQELAKPHVLERCTVLPFLEFLHMFIDNKDDVSNLRKCFAGLWSLDNNANVIEDAIRRPESFVLKPQREGGGNNIYGNDVKEKLLELKRNGGDGHAAYILMQRIFPPIHVSYLARGGIYQHGETVSELGIFGAYLRSKDNVILNNQSGYLMRTKVSSSNEGGVAAGFAVVDSLYLI*

Protein Length: 192

Fln nts: GAACCCTTTTGAAGGTTTGAGCCGATACTGGGCGGATCCTAGGTGGATCCGAATTCGCACACGATCTGGGGATCTGCGGTTCAATATCCCAGGGTGGACGGATCAGTTTGTGGACCAACTCAAGCTCAAGGAAATGGAGTCTGAGAGGTATGAGAAAGAGTTAGCAGTTGATTCCAACAAGGGCATTTCCTCTTTTGAGGACATCTCTCCAGTATTGGCAAAGGAGCTTCTGCAAGATGCACTCGTGTGGGCTTCCTTACATGGCCTTGTGGTTGGCGATAGGGCTGTACAGGGTTCTGGACAAATCCCGGGTGTTGGGTTGGTGCATGCTCCGTTTGCTCTCTTGCCAACACCTTTTCCAGAAGGCTGTTGGAAACAGGCCTGTGATTTGGCACCCTTATTTAATGAGCTTGTAGATCGAGTCAGCATGGACGGAGTTTTTCTGCAAGAGTCACTTTCCAGGACAAAGACAGCTGATGCCTTCACTGCTCGACTCTTAGATATCCATTCTAGTATAATGAAAGATAACATAAAACAGGAAATACGCTTGGGTCTTCATCGTTCAGATTATATGCTTGATATAGCTACAGGAAAACTGCTACAAGTAGAGCTTAATACAATATCATCGTCTTTTGCAGGACTTGGTTGCCTTGTTAGTCAGCTTCACAGATACTTGATCAATCATTCTGGGAAGAAACTTAGCTTGGATTCAAAAAGAGTACCTGAAAACACAGCAGCAAACAAATTTGCAGAGGCATTGGCCCTAGCCTGGAAGGAGTTCAATGACTTAAGTTCTGTAGTACTGGTAGTTGTGCAGCCAGAGGAGCGTAATATGTATGATCAACACTGGATTTGCATGGTGCTGAAAGAATCATATGCGGTGCCATCTATCCGGAAAACTCTAGCTGAAATTGATGCTGAGGGTGAACTTTTATCAAATGGAACTCTTCACATAGGACAACGAGCTGTTGCTGTTGTTTACTTCAGGGCTGGATATACACCTGTTGATTATCCCTCTGAAGCAGAGTGGAGAGCTAGACTAATGTTGGAGCAGTCGTCTGCCATCAA_-_ATGCCCTTCAATTTCATATCATTTAGCAGGCACAAAAAAATTCAACAAGAATTGGCTAAACCTCATGTTCTGGAAAGGTGCACTGTGCTTCCTTTTCTAGAATTTTTGCACATGTTCATCGATAATAAAGATGACGTTTCTAATCTTAGGAAATGCTTTGCTGGATTATGGAGCTTGGACAATAATGCAAATGTTATAGAAGATGCCATCAGAAGGCCAGAATCATTTGTGCTGAAGCCCCAGCGTGAAGGAGGGGGAAATAACATATATGGAAATGATGTCAAGGAAAAATTACTTGAGTTGAAAAGAAATGGTGGTGATGGACATGCTGCTTACATACTAATGCAAAGGATCTTTCCTCCAATTCATGTGTCATATCTTGCCCGTGGTGGTATCTATCAACACGGTGAAACTGTGTCTGAACTTGGCATATTTGGTGCATATTTACGGAGTAAAGACAATGTGATACTAAACAACCAAAGTGGTTATCTCATGAGAACAAAAGTTTCTTCCTCCAATGAGGGTGGTGTTGCTGCAGGCTTTGCTGTTGTGGATAGTCTCTATCTAATTTGA___GTTATCTTCAATTGTACCCTGTGAATTTATGGCATGGAAATTTAAGGAACCTTTTCATTGTCTAATTGGTATTGATTTTTCCATTTCAGTTCTCTTGGAAATGAGAATGTCAACTCCGTTACTTTGCTCGTAGCATGTTCACCTATTGGTTGTCCCACCTCCTGAGAGAATATTCAAATGAAAATAGAATGTGTGCTGGCCTAGTTATAAACTGGTAAAGCTTAGC

Fln Alignment:

Contig28187___KKIQQELAKPHVLERCTVLPFLEFLHMFIDNKDDVSNLRKCFAGLWSLDNNANVIEDAIRRPESFVLKPQREGGGNNIYGNDVKEKLLELKRNGGDGHAAYILMQRIFPPIHVSYLARGGIYQHGETVSELGIFGAYLRSKDNVILNNQSGYLMRTKVSSSNEGGVAAGFAVVDSLYL
D5A8U7_______________KKIQQELAKPHVLER------------FIDNKDDIANLRKCFAGLWSLDNNANVIEDAIRRPEAFVLKPQREGGGNNIYGNDAKEKLLEMKRNGGDGHAAYILMQRIFPPFHVSYLVRGGIYHHGETFSELGIFGAYLRNKDNVLLNNQSGYLMRTKISSSDEGGVAAGFAVVDSLYL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain