SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27767

Length: 1338 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27767

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Iaa-amino acid hydrolase 5 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDG8_POPTR	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	78%
Blast2go	iaa-amino acid hydrolase ilr1	-	-	74%

Source	InterPros	Term	Type	Identity
Sma3	Amidohydrolase	IPR017439	-	-
Sma3		IPR010168	-	-
Sma3	Peptidase M20	IPR002933	-	-
Sma3	Peptidase M20, dimerisation	IPR011650	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMJ2

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 433 - 456

Fln protein: *MACSPVKLLLLLVLVGIDSEITVRAEEQREEEVNFLKAAKDEDMFEWLKWVRRKIHRHPELMFKEFNTSKLIRQELDAMGVHYEWPFAQTGVVATIGSGTAPVVALRADMDALPLQELVDWEHKSVNTGKMHACGHDAHVTMLLGAAKLLHQHKDKLKGTVRLIFQPAEEGGAGAAHMIREGALGDAEAIFAMHVMPSHSTGTIASTPGPILAGSGIFEAVIEGKGGHAGIPHMTVDPVVATTFAILSLQQIVSRETDPLDSQVVSITFIEGGKGFSVIPSKVRFGGSFRSLTYEGLGKIKRRIKEIIEKQAAGNGCVAFIDFNGEFPEYPPTLNDERMHNHIQKVGTTLLGERNVKSRGRNMAAEDFAFYSQIIPGGFFMIGVKNESIGATHSVHSPHFFLDEEVLPLGAALHAAIAKMYLDHGGPATKA*

Protein Length: 434

Fln nts: ATAGATGGCCTGTTCTCCAGTCAAACTGTTGTTACTGCTTGTCCTTGTGGGTATTGACTCGGAAATCACAGTAAGAGCAGAAGAGCAACGAGAGGAAGAGGTAAATTTTCTCAAAGCCGCCAAAGATGAAGATATGTTTGAGTGGCTGAAGTGGGTGAGAAGGAAAATTCACAGGCATCCTGAGCTCATGTTTAAGGAGTTCAATACCAGCAAGCTGATAAGGCAAGAACTGGATGCAATGGGAGTGCATTATGAATGGCCCTTTGCACAGACAGGTGTGGTTGCCACTATCGGATCCGGCACTGCCCCTGTTGTTGCTCTCCGTGCTGACATGGATGCTCTCCCATTGCAGGAACTTGTGGATTGGGAGCACAAGAGTGTAAATACTGGTAAGATGCATGCTTGTGGGCATGATGCACATGTCACTATGCTTCTTGGAGCTGCTAAATTGCTTCATCAACACAAGGATAAACTGAAGGGCACCGTAAGGCTTATTTTTCAACCAGCTGAAGAAGGAGGTGCAGGTGCTGCTCACATGATTCGTGAAGGTGCACTTGGAGATGCAGAAGCCATATTTGCTATGCATGTTATGCCTAGTCACTCAACTGGGACTATAGCATCAACCCCAGGGCCAATTTTGGCTGGGTCAGGCATTTTTGAAGCTGTTATAGAAGGAAAAGGTGGGCATGCAGGCATACCACATATGACTGTAGATCCAGTTGTAGCTACAACCTTTGCAATTTTGAGCTTACAGCAGATTGTTTCTCGAGAAACTGATCCTCTCGACAGCCAAGTAGTCTCAATAACATTCATTGAAGGTGGTAAGGGATTCAGTGTCATTCCGAGCAAGGTTAGATTTGGAGGTTCGTTTCGGAGTCTTACATATGAAGGACTTGGTAAGATAAAGAGAAGAATCAAAGAGATTATTGAAAAGCAAGCTGCTGGAAATGGGTGTGTAGCATTTATTGATTTTAATGGAGAATTCCCTGAATATCCTCCTACTCTCAATGACGAAAGGATGCATAATCACATTCAAAAGGTTGGAACAACTTTGCTTGGGGAACGTAATGTGAAGTCAAGAGGTCGGAATATGGCAGCAGAAGATTTTGCCTTCTATTCACAGATCATACCAGGTGGATTTTTTATGATTGGAGTGAAAAATGAGAGCATCGGCGCAACCCATTCAGTTCACTCTCCTCATTTTTTCTTAGATGAAGAAGTGCTTCCTCTTGGAGCGGCTTTACATGCCGCAATTGCTAAAATGTATTTGGACCATGGCGGACCAGCCACTAAGGCATAG___ATCAGATCATATCAACCATAGATCAAATCATATCAGCC

Fln Alignment:

Contig27767___ITVRAEEQREEEVN-FLKAAKDEDMFEWLKWVRRKIHRHPELMFKEFNTSKLIRQELDAMGVHYEWPFAQTGVVATIGSGTAPVVALRADMDALPLQELVDWEHKSVNTGKMHACGHDAHVTMLLGAAKLLHQHKDKLKGTVRLIFQPAEEGGAGAAHMIREGALGDAEAIFAMHVMPSHSTGTIASTPGPILAGSGIFEAVIEGKGGHAGIPHMTVDPVVATTFAILSLQQIVSRETDPLDSQVVSITFIEGGKGFSVIPSKVRFGGSFRSLTYEGLGXXXXXXXXXXXXQAAGNGCVAFIDFNGE-FPEYPPTLNDERMHNHIQKVGTTLLGERNVKSRGRNMAAEDFAFYSQIIPGGFFMIGVKNESIGATHSVHSPHFFLDEEVLPLGAALHAAIAKMYLDHGGP
B8LMJ2_______________LPVSAQESAVTEAQGLLKDAKGEETFEWLKSIRRRIHRNPELKFEEFNTSKLIRDELDAMGVHYEWPFAQTGVVATIGSGTAPVVALRADMDALPLQELVDWEHKSVNIGKMHACGHDAHVTMLLGAAKLLHKHKDKLQGTVRLIFQPAEEGGAGAAHMIREGALGDAEAIFAMHVTPGLSTGAIVSIPGPILAGASIFEAVIEGKGGHAAMPHITADPIVATSFAILSLQQIVSRESDPLDSQVVSVTFMDGGKGFNIIPNKVRFGGTLRSLTSEGLAKIRRRIKEIIEKQAAVNGCTGFVDFKEDTHPEYPPTVNDEKLHNHVKKAGQTLLGAHNVKDANPVMGAEDFAFYTHIIPGAFFLVGVRNESINSIHSLHSPRFFLDEKVLPLGAALHATIAKMYLDHGGP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain