SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27748

Length: 1194 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27748

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	nucleic acid binding	-	-	57%

Source	InterPros	Term	Type	Identity
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3	Aldo/keto reductase	IPR001395	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZ53

Fln msg:

Fln protein: MEDYTVQVCNLSPKATVQDVKQFFSYSGTVKKARLQRAGQWSQVAFVTFKEPYASETAILLNGATIIDQRVRIVYWEGSEEAVNRWKKQMMELQEEDNAPGISSYLPSPGQAVNVVTTMLSKGYTLGKDTVNKAIELDQKYQVINTTATNLTSFGKFVGQTAYSAGTAAGRAAYSAGTAAVNSSYFSSGAMMVSGALSRAAKAAADLGTRGNTET*

Protein Length: 217

Fln nts: ACGCGGGGGTCAATAAAAATCTTACAGTAAAGAATTTACTTAAACTTCCTAGCCAATCAATGTGACAGTATTTATATGAGAGCAGTATTTGTTGATCCCTCACAATCTCAGTCGCAAGAAGAGAATTTTGCATCATAGCAAGTTGCCCCAGTGTTAACAATTGCCATT_-_ATGGAGGATTACACAGTGCAGGTCTGTAATTTATCTCCCAAAGCAACTGTGCAGGATGTGAAGCAGTTCTTCTCTTACTCTGGCACAGTTAAGAAAGCAAGATTACAAAGGGCTGGACAGTGGTCACAAGTTGCTTTTGTGACTTTCAAGGAGCCCTATGCTTCAGAAACTGCTATCCTTCTGAATGGAGCCACAATCATAGATCAGAGAGTACGTATAGTATACTGGGAAGGATCAGAGGAGGCAGTTAATCGTTGGAAGAAGCAGATGATGGAACTTCAAGAAGAAGACAACGCACCAGGAATTAGCAGCTATCTTCCATCTCCTGGCCAGGCAGTAAATGTGGTTACCACAATGCTTTCTAAAGGATATACCTTAGGAAAGGACACAGTAAACAAAGCAATTGAGTTAGACCAGAAGTATCAAGTCATAAACACCACTGCAACCAATTTGACATCTTTTGGCAAGTTCGTTGGGCAAACAGCATACAGTGCAGGAACTGCAGCCGGGCGAGCAGCATACAGTGCAGGAACCGCAGCTGTCAACAGCAGTTATTTTTCTTCAGGAGCCATGATGGTTTCTGGAGCTCTGAGCAGGGCAGCCAAAGCTGCTGCTGATTTGGGTACTAGAGGTAATACAGAAACATAA___GTAAAAGCAGAGACTTATGTCAGTAGTCGATCTTAGCTTAGAGATATAATTTAGTGGGTACTATTTGCATATGGTGTATGCAATATGATGAAGTAATAAACTAGTCCATATTTGATACTTGCGATTTCAAGTATTCCCAACTCAGGGACTTTAAAGGAATTATGTATTCAAACCTATATTTTCTTGTCATTTTGGGTTATACATTCTGATTTTTACATGTTTAAAGATATGGCCAAATGGATACTATCATGGATCTGAGATTACAGATTTAAATGTTCTAAGAAGCCAAGTAAACGTATTTAGCTTAGTTGACTCTCCTCTGGAGATATGTCAACGTGAATCTTACATGGGGCATCGATTATCTAATAGACCATTGAC

Fln Alignment:

Contig27748___MEDYTVQVCNLSPKATVQDVKQFFSYSGTVKKARLQRAGQWSQVAFVTFKEPYASETAILLNGATIIDQRVRIVYWEGSEEAVNRWKKQMMELQEEDNAPGISSYLPSPGQAVNVVTTMLSKGYTLGKDTVNKAIELDQKYQVINTTATNLTSFGKFVGQXXXXXXXXXXXXXXXXXXXXVNSSYFSSGAMMVSGALSRXXXXXXDLGTRGNTET
A9NZ53_______________MDDYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLLTGATIIDQRVRIVQWEGSEEALNRWKKQMMELQEEGDTQGLSSFIPSAGQAVNVVTTMLSKGYTLGKDALSKAYELDQKYQVIDTAATNLTSFGKFVGEKSKAALIVAGQAACSAGTAVVNSSYFSSGALMVSGALDKAAKAAADLGTRGNTTT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain