SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27542

Length: 1275 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27542

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PATATIN-like protein 6 [Arabidopsis thaliana] gb\|AAC28986.1\| similar to latex allergen from Hevea brasiliensis [Arabidopsis thaliana] gb\|AAL32726.1\| putative patatin protein [Arabidopsis thaliana] gb\|AAN31902.1\| unknown protein [Arabidopsis thaliana] gb\|A	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	29%
Blast2go	protein	-	-	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to other organism	GO:0051707	Biological Process	0.0	73%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Patatin/Phospholipase A2-related	IPR002641	-	-
Sma3	Protein of unknown function DUF642	IPR006946	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMU7

Fln msg:

Fln protein: RSMTLKETVKPLLIPCYDLSSAAPFLFSRADALETDNFDFRLWEVCRAAAAAPGFFEPVLMSSVDGQTACTAIDAGLVMNNPTAAAITHVLHNKQEFPSVGGVEDLLVLSIGTGQFDRAYDYDKVKRWGAAHWAKPIFKIVGDAVSDNVDHAMSMAFGQSRRNYVRIQGSGFPEKCMGDADDPSEENVKMLINFADGILKQKSLESLPFGGKRKLSLSNAERLDWLAEQVVAEHLSRLSRPIPTVLLKQPSPPSSLSSSARISP*

Protein Length: 266

Fln nts: CGGAGCATGACGCTGAAGGAAACGGTAAAGCCCCTCTTGATTCCCTGCTATGACCTGTCCAGCGCGGCCCCTTTTCTTTTCTCCCGCGCGGACGCGCTCGAGACTGATAACTTCGACTTCCGCCTCTGGGAAGTCTGCCGGGCGGCGGCGGCAGCGCCGGGGTTCTTCGAGCCCGTGCTCATGAGCTCCGTCGACGGGCAGACCGCCTGCACGGCGATCGACGCTGGGTTGGTGATGAACAATCCCACCGCGGCGGCCATAACCCATGTTCTGCATAACAAGCAGGAGTTTCCGTCTGTGGGAGGCGTGGAGGATTTGCTGGTGCTTTCAATCGGAACCGGGCAGTTCGATCGGGCATACGATTACGACAAGGTGAAGCGATGGGGGGCTGCCCACTGGGCTAAACCCATCTTCAAAATCGTGGGCGATGCAGTGTCCGACAATGTTGATCACGCCATGAGCATGGCATTCGGGCAAAGCAGGCGCAATTACGTCAGGATTCAGGGGAGCGGATTCCCGGAGAAATGCATGGGCGATGCCGACGATCCGAGCGAAGAAAATGTGAAGATGCTGATCAATTTTGCAGACGGCATATTGAAGCAAAAGAGCCTGGAGTCTCTCCCCTTCGGAGGAAAACGAAAGCTCTCTCTCAGCAACGCCGAGAGGCTCGACTGGCTCGCCGAACAGGTGGTTGCAGAGCATCTGTCAAGACTTTCGAGGCCCATTCCCACTGTACTGCTGAAGCAGCCGAGCCCTCCAAGCTCACTATCGAGTTCCGCACGCATATCGCCCTAA___CAATTCCCAATCATTCTTCAAAATGACTTGTTTTGACAGGAAGGGAGAAAAAATCCGAAATGCAGGCACCCTCTGCAATTTTTTAGTGTTTTATATTGATGGGCCAAGTAGGTAATTAACGGTGTTTGTTAGATAGTTTTTGCGGCTACTGGATGTAGCTAATTAACGGCGTTGTTAGATGGTTTTTGCGAGCTGCAATTAGTGACCGGAAGTAGATGATTAACGGCGTTGTTAGATAGGTTTTACGATTAGCCATAGCCGCCGGCTTGCCAGCGATAAAAATCTGAGATCCGAGCCCAGCTGTGCTGTTTGCTGTCTGTACATTATGGTCCTAATATGACTGTACGTGTGGGTGACTGTTCACTGTAACTATATAATGGTATTTGGTTGGATTGATCATCAATGTGTGAAGGCCTTCGTACACTGTAGAGGATTGGGAATGTCTCCGTATGACTGACAAAATTAACACATGAAGTGAAA

Fln Alignment:

Contig27542___RSMTLKETVKPLLIPCYDLSSAAPFLFSRADALETDNFDFRLWEVCRAAAAAPGFFEPVLMSSVDGQ---TACTAIDAGLVMNNPTAAAITHVLHNK---QEFPSVGGVEDLLVLSIGTGQFDRAYDYDKVKRWGAAHWAK-----PIFKIVGDAVSDNVD-HAMSMAFGQSRRNYVRIQGSGFPEKCMGD----ADDPSEENVKML
B8LMU7_______________RDIRLNETLTDVVIPAYDINLQQPIIFSSLEARKDKSKDAFLSDVCIGTSAAPMYLPSHCFTTQDSQGKPRSFHLIDGGVAANDPTSLAINHLMNEGLTCKTNPPQNEWSKCLVLSLGTGQKIAGYKATDTAKWGLFGWLNKDGKAPLIDILMQSSTDMVDIHKSFLLKAFNMHTYLRIQ-----EPELGDDRSSFDLSTEENLNGL

SSRs (tot: 1)

Start position	End position	Sequence	Length
141	152	GGC GGC GGC GGC	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain