SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27496

Length: 772 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene27496

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Adenine nucleotide alpha hydrolases-like protein n=5 Tax=Arabidopsis RepID=F4J7I5_ARATH	-	-	6.0e-15	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	adenine nucleotide alpha hydrolases-like protein	-	-	0.0	64%

Source	InterPros	Term	Type	Identity
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-
Sma3	Universal stress protein A	IPR006015	-	-
Sma3	UspA	IPR006016	-	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
367		14	85		0.999981
369		85		14	0.999981
370	85	14			0.999981
372	85			14	0.999981
377		85		14	0.999981
378	85			14	0.999981
379			14	85	0.999981
381		14		85	0.999981
385		14	85		0.999981
399	90			9	0.999872
407	90	9			0.999872
771	11	33		55	1.0
773	50	16	33		1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
170	183	CAG CAG CAG CAG CA	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain