SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene27170

Length: 1996 nt

UniGene Fasta

>sp_v2.0_unigene27170
AATCGGCATTTAGGTTTAGCCAAAATCCGCGGCTTTCCCTTAGATCTGCCTGTTTTCTCCCCTGTCTCTGTGCAGCAATGGCGCTTTACACTGAGAAAACGGTGTCCGGAAGGGAATACAAGGTTAAGGACATGTCTCAGGCCGACTTCGGAAGGCTGGAGATCGAGTTGGCTGAAGTTGAGATGCCTGGACTGATGGCCTGCCGGGTCGAGTTCGGACCTGCCCAGCCCTTCAAGGGCGCCCGGATCACGGGTTCCCTCCACATGACTATCCAAACCGCTGCTGAGGTGAGATGGTGCTCCTGCAACATATTCTCCACTCAGGACCATGCCGCGGCCGCCATCGCTCGCGATAGCGCGGCAGTGTTTGCCTGGAAGGGGGAAACACTGCAGGAGTACTGGTGGTGCACCGAGAGGGCTCTTGACTGGGGCCCTGGTGGCGGCCCTGATCTAATTGTTGACGATGGCGGTGACACTACACTTCTGATACATGAGGGAGTGAAGGCCGAGGAAGAGTTTGCCAAGACTGGGAAGGTGCCAGATCCGTCTTCTACCACCAATGTGGAGTTTCAGATCGTGTTGGAGTTGATCAAGGAAAGCCTCAAGGTGGATCCATTGAGGTATCACAGAATGAAGGATAGAATTGTTGGTGTGTCTGAGGAGACTACTACTGGGGTTAAGAGGCTTTACCAGATGCAGAATGCCGGGTCCCTGCTGTTCCCTGCTATCAATGTTAATGACTCTGTTACAAAGAGCAAGTTTGACAACTTGTATGGTTGTAGGCACTCTCTCCCAGACGGTCTTATGAGAGCCACAGATGTCATGATTGCTGGTAAGGTTGCTGTTGTTTGTGGGTTTGGAGATGTTGGCAAGGGTTGTGCTGCAGCCTTGAAAGTCGCTGGAGCTAGGGTCATTGTTACAGAGATTGATCCTATCTGTGCCCTGCAAGCTCTTATGGAAGGCCTTCCTGTCCTCACCCTTGAGGATGTAGTTAGCACTGCTGATATCTTTGTGACAACCACTGGCAACAAGGACATCATCATGGTAGATCACATGCGGAAAATGAAGAACAATGCCATTGTTTGCAACATCGGTCACTTTGACAACGAGATTGATATGCAAGGCCTTGAAACTTTCCCTGGCGTTAAGAAGATTACCATCAAGCCTCAGACTGACAGGTGGGTGTTCCCTGACACCAACAGTGGCATCATTACTGGCCACCCAAGTTTTGTCATGTCTTGCTCCTTTACAAACCAGGTCATTGCTCAGTTAGAGCTCTGGAACGAGAAGAAATCAGGGAAGTATGAGAAGAAGGTCTATGTGCTGCCTAAGCATCTAGATGAGAAGGTGGCTGCTCTGCACTTGCCCAAGTTGGGTGCCAAGCTAACAAAGCTTTCTCCTGATCAGGCAGAGTATATCAATGTGCCTATTGAGGGGCCTTACAAGCCTGCTCACTACCGATACTGAAAAGATCTGACATTTGGGATGGCTTGTTGGACGAGTAGCAAAGGTCCTCGCTGTTTGTTTGGCAGCTCTGTTGTTTTAAGGGACCTTACAAGCCTCCTGACTACATACTGAAGAGATGACATTTTGGGTGAGACCTGCTCGGCGAGTATCAAGTTGCAATGCTCCTCGACATATAAAAATCTGGCCTCTCTTTGTCGGCATCTCCATTGTTTGGGTAGAATTATAATAAAATTTTGCTATCGCTTGTATGCGTGGCTGCTGAATTTCTTGCAGCATCACATCAAGCATCTCGTTTTAATACTGGTATATGGTTTAATAGTTTATATGTGGCATTTGTATTGCTCAAAATTCAGTTTGGAAGCAAAAATATAAGGATGCCTCTGGGTTTCTATCCAGCACTGGCATGTTATGAATCAAATGAATTTCAGGTCAAGGACCGCAATTTTCACACAAAATCTCATGGACATGCATATTCGGTTTTGTTAACGCATCTCTTTTTATTACTGGTATATGGTTTAATAGTTTATTAG

Ace file of the UniGene sp_v2.0_unigene27170

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI	-	-	89%
FL-Next	sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	92%
Blast2go	s-adenosyl-l-homocysteine hydrolase	-	-	91%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenosylhomocysteinase.	EC:3.3.1.1	-	0.0	91%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Cysteine and methionine metabolism	00270		0.0	91%
Blast2go	Metabolic pathways	01100		0.0	91%

Source	GOs	Term	Type	Identity
Blast2go	posttranscriptional gene silencing	GO:0016441	Biological Process	91%
Blast2go	methylation-dependent chromatin silencing	GO:0006346	Biological Process	91%
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	91%
Blast2go	copper ion binding	GO:0005507	Molecular Function	91%
Blast2go	adenosylhomocysteinase activity	GO:0004013	Molecular Function	91%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	91%
Blast2go	plasma membrane	GO:0005886	Cellular Component	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	Adenosylhomocysteinase	IPR000043	-	0.0	-
Sma3	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	IPR015878	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NUB8

Fln msg: your sequence is shorter than subject: 463 - 485

Fln protein: MALYTEKTVSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRVEFGPAQPFKGARITGSLHMTIQTAAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEEFAKTGKVPDPSSTTNVEFQIVLELIKESLKVDPLRYHRMKDRIVGVSEETTTGVKRLYQMQNAGSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGFGDVGKGCAAALKVAGARVIVTEIDPICALQALMEGLPVLTLEDVVSTADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMQGLETFPGVKKITIKPQTDRWVFPDTNSGIITGHPSFVMSCSFTNQVIAQLELWNEKKSGKYEKKVYVLPKHLDEKVAALHLPKLGAKLTKLSPDQAEYINVPIEGPYKPAHYRY*

Protein Length: 464

Fln nts: AATCGGCATTTAGGTTTAGCCAAAATCCGCGGCTTTCCCTTAGATCTGCCTGTTTTCTCCCCTGTCTCTGTGCAGCA_-_ATGGCGCTTTACACTGAGAAAACGGTGTCCGGAAGGGAATACAAGGTTAAGGACATGTCTCAGGCCGACTTCGGAAGGCTGGAGATCGAGTTGGCTGAAGTTGAGATGCCTGGACTGATGGCCTGCCGGGTCGAGTTCGGACCTGCCCAGCCCTTCAAGGGCGCCCGGATCACGGGTTCCCTCCACATGACTATCCAAACCGCTGCTGAGGTGAGATGGTGCTCCTGCAACATATTCTCCACTCAGGACCATGCCGCGGCCGCCATCGCTCGCGATAGCGCGGCAGTGTTTGCCTGGAAGGGGGAAACACTGCAGGAGTACTGGTGGTGCACCGAGAGGGCTCTTGACTGGGGCCCTGGTGGCGGCCCTGATCTAATTGTTGACGATGGCGGTGACACTACACTTCTGATACATGAGGGAGTGAAGGCCGAGGAAGAGTTTGCCAAGACTGGGAAGGTGCCAGATCCGTCTTCTACCACCAATGTGGAGTTTCAGATCGTGTTGGAGTTGATCAAGGAAAGCCTCAAGGTGGATCCATTGAGGTATCACAGAATGAAGGATAGAATTGTTGGTGTGTCTGAGGAGACTACTACTGGGGTTAAGAGGCTTTACCAGATGCAGAATGCCGGGTCCCTGCTGTTCCCTGCTATCAATGTTAATGACTCTGTTACAAAGAGCAAGTTTGACAACTTGTATGGTTGTAGGCACTCTCTCCCAGACGGTCTTATGAGAGCCACAGATGTCATGATTGCTGGTAAGGTTGCTGTTGTTTGTGGGTTTGGAGATGTTGGCAAGGGTTGTGCTGCAGCCTTGAAAGTCGCTGGAGCTAGGGTCATTGTTACAGAGATTGATCCTATCTGTGCCCTGCAAGCTCTTATGGAAGGCCTTCCTGTCCTCACCCTTGAGGATGTAGTTAGCACTGCTGATATCTTTGTGACAACCACTGGCAACAAGGACATCATCATGGTAGATCACATGCGGAAAATGAAGAACAATGCCATTGTTTGCAACATCGGTCACTTTGACAACGAGATTGATATGCAAGGCCTTGAAACTTTCCCTGGCGTTAAGAAGATTACCATCAAGCCTCAGACTGACAGGTGGGTGTTCCCTGACACCAACAGTGGCATCATTACTGGCCACCCAAGTTTTGTCATGTCTTGCTCCTTTACAAACCAGGTCATTGCTCAGTTAGAGCTCTGGAACGAGAAGAAATCAGGGAAGTATGAGAAGAAGGTCTATGTGCTGCCTAAGCATCTAGATGAGAAGGTGGCTGCTCTGCACTTGCCCAAGTTGGGTGCCAAGCTAACAAAGCTTTCTCCTGATCAGGCAGAGTATATCAATGTGCCTATTGAGGGGCCTTACAAGCCTGCTCACTACCGATACTGA___AAAGATCTGACATTTGGGATGGCTTGTTGGACGAGTAGCAAAGGTCCTCGCTGTTTGTTTGGCAGCTCTGTTGTTTTAAGGGACCTTACAAGCCTCCTGACTACATACTGAAGAGATGACATTTTGGGTGAGACCTGCTCGGCGAGTATCAAGTTGCAATGCTCCTCGACATATAAAAATCTGGCCTCTCTTTGTCGGCATCTCCATTGTTTGGGTAGAATTATAATAAAATTTTGCTATCGCTTGTATGCGTGGCTGCTGAATTTCTTGCAGCATCACATCAAGCATCTCGTTTTAATACTGGTATATGGTTTAATAGTTTATATGTGGCATTTGTATTGCTCAAAATTCAGTTTGGAAGCAAAAATATAAGGATGCCTCTGGGTTTCTATCCAGCACTGGCATGTTATGAATCAAATGAATTTCAGGTCAAGGACCGCAATTTTCACACAAAATCTCATGGACATGCATATTCGGTTTTGTTAACGCATCTCTTTTTATTACTGGTATATGGTTTAATAGTTTATTAG

Fln Alignment:

Contig27170___MALYTEKTVSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRVEFGPAQPFKGARITGSLHMTIQTA----------AEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEEFAKTGKVPDPSSTTNVEFQIVLELIKESLKVDPLRYHRMKDRIVGVSEETTTGVKRLYQMQNAGSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGFGDVGKGCAAALKVAGARVIVTEIDPICALQALMEGLPVLTLEDVVSTADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMQGLETFPGVKKITIKPQTDRWVFPDTNSGII-------------TGHPSFVMSCSFTNQVIAQLELWNEKKSGKYEKKVYVLPKHLDEKVAALHLPKLGAKLTKLSPDQAEYINVPIEGPYKPAHYRY
A9NUB8_______________MALLAEKTVSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRVEFGPAQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAASAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEEFAKTGKVPDPASTTNVEFQIVLALIKESLKVDPLRYHRMKDRIVGVSEETTTGVKRLYQMQNSGSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAAMKVAGARVIVTEIDPICALQALMEGLPVLTLEDVVSTADIFVTTTGNKDIIMLDHMRKMKNNAIVCNIGHFDNEIDIQGLENFPGVKKITIKPQTDRWVFPDTKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKSGKYEKKVYVLPKHLDEKVAALHLPKLGAKLTKLSPDQAEYINVPVEGPYKPAHYRY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain