SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26880

Length: 940 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene26880 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF674 domain containing protein	-	-	1.0e-24	31%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	uncharacterized protein loc100843303	-	-	0.0	59%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF674	IPR007750	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P1F2

Fln msg:

Fln protein: MAAGDQSESKPKPMTITLMVAKKGRKIMYAEAGKDFVDLLFSFLMIPAGAIAKQVLVSKGTKGEDQTKTCCIKNLYESVQNLAPSLLKADKEILLDPKVFSTAYTNDTLGIQAPPRPKPEAPPRYFMCSNFASRYGHPHSISTSCGTVACSSCGNSVNREVKFIDKPPEPAKDPAPKGFVKKSANFVITDDLSVIPVNSTATIVQLWNKLDVKEPTELEERNVTVGPNEVIGLLRAAMVSTTALNDVFKAGSKYMTPGDMETTGISLQELLLKLLIEDQKSRSSSKVTV*

Protein Length: 291

Fln nts: ATGGGGGACCTTACTGGTGTATTCACTCTTAACAACATAAGAAAGAGAAGCTCCAGAGAATTGCC_-_ATGGCAGCCGGTGACCAGTCTGAGAGTAAGCCTAAGCCCATGACCATAACACTAATGGTCGCGAAGAAAGGTCGTAAGATAATGTACGCAGAAGCCGGGAAAGATTTTGTGGATCTGCTATTTAGTTTTCTCATGATTCCAGCGGGGGCCATTGCCAAGCAGGTACTGGTCTCCAAAGGGACCAAGGGCGAGGATCAGACAAAGACTTGCTGCATTAAAAATCTGTATGAGAGCGTGCAGAACCTGGCACCCTCGCTTCTGAAAGCCGACAAAGAAATTCTATTAGACCCAAAGGTTTTCTCCACAGCCTACACCAATGACACTTTGGGAATTCAAGCTCCTCCTCGACCTAAACCTGAAGCTCCTCCCAGGTATTTTATGTGCAGTAACTTTGCTTCCCGTTACGGCCACCCACACAGTATTAGCACGAGCTGTGGAACTGTGGCATGTTCCTCCTGCGGCAATTCAGTAAATCGTGAAGTGAAGTTCATCGACAAACCCCCTGAACCTGCCAAGGACCCCGCGCCTAAGGGGTTTGTTAAGAAGAGTGCGAATTTTGTCATCACAGACGACTTGAGCGTAATTCCAGTTAATTCCACTGCCACGATTGTTCAGTTGTGGAATAAACTTGATGTCAAGGAGCCAACGGAATTAGAAGAACGGAATGTTACAGTTGGCCCCAACGAGGTGATAGGTTTGCTCAGAGCTGCTATGGTTTCTACCACTGCTTTAAATGATGTCTTCAAGGCTGGCTCTAAGTATATGACTCCGGGGGATATGGAGACTACTGGAATCTCGCTGCAGGAGCTTCTGCTAAAATTGCTGATTGAAGACCAGAAGTCTCGTAGCAGCAGCAAGGTGACCGTCTGA___CAAAA

Fln Alignment:

Contig26880___MAAGDQSESKPKPMTITLMVAKKGRKIMYAEAGKDFVDLLFSFLMIPAGAIAKQVLVSKGTKGEDQTKTCCIKNLYESVQNLAPSLLKADKEILLDPKVFSTAYTNDTLGIQXXXXXXXXXXXRYFMCSNFASRY-GHPHSISTSCGTVACSSCGNSVNREVKFIXXXXXXXXXXXXKGFVKKSANFVITDDLSVIPVNSTATIVQLWNKLDVKEPTELEERNVTVGPNEVIGLLRAAMVSTTALNDVFKAGSK
A9P1F2_______________MAAGDPSESKSKPMTITLMVTKKGRKIMYAEAGKDFVDLLFSFLMIPTGAIAKQALVSKGTKEEDQTKTCCIKNLYDSVQNLSPSLLKADKEILLDPKFFSVTYTNDILRIQSPPRPQPAAPPRYFMCTNFASRYHSHPHSISTECGTVTCSSCGSLVNRELKFVDKPPEPAKDPVPTGYVKKSANFVITDDLSVIPVNSTAAIVQLWNKLDVKEPTELEERNVTVGPNEVIGLLRAAMVSTTALNDVFKAGSK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain