UniGene Name: inia_v1.0_unigene6085
Length: 213 nt
UniGene Fasta |
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>inia_v1.0_unigene6085
G |
Ace file of the UniGene inia_v1.0_unigene6085 |
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Annotations |
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Parent Assembly | Parent UniGene | Reads (related/total) |
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SustainPine v2.0 | sp_v2.0_unigene15693 | 2/2 |
Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Aconitase, putative n=9 Tax=Spermatophyta RepID=B9SDW5_RICCO | - | - | 0.0 | 81% |
Blast2go | aconitate hydratase | - | - | 0.0 | 91% |
Source | ECs | Term | Type | e value | Identity |
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Blast2go | Aconitate hydratase. | EC:4.2.1.3 | - | 0.0 | 91% |
Source | KEGGs | Term | Type | e value | Identity |
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Blast2go | Citrate cycle (TCA cycle) | 00020 | 0.0 | 91% | |
Blast2go | Glyoxylate and dicarboxylate metabolism | 00630 | 0.0 | 91% | |
Blast2go | Carbon fixation pathways in prokaryotes | 00720 | 0.0 | 91% | |
Blast2go | Biosynthesis of phenylpropanoids | 01061 | 0.0 | 91% | |
Blast2go | Biosynthesis of terpenoids and steroids | 01062 | 0.0 | 91% | |
Blast2go | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 0.0 | 91% | |
Blast2go | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 0.0 | 91% | |
Blast2go | Biosynthesis of alkaloids derived from histidine and purine | 01065 | 0.0 | 91% | |
Blast2go | Biosynthesis of alkaloids derived from terpenoid and polyketide | 01066 | 0.0 | 91% | |
Blast2go | Biosynthesis of plant hormones | 01070 | 0.0 | 91% | |
Blast2go | Metabolic pathways | 01100 | 0.0 | 91% | |
Blast2go | Biosynthesis of secondary metabolites | 01110 | 0.0 | 91% |
Source | GOs | Term | Type | e value | Identity |
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Blast2go | response to oxidative stress | GO:0006979 | Biological Process | 0.0 | 91% |
Blast2go | response to salt stress | GO:0009651 | Biological Process | 0.0 | 91% |
Blast2go | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | 91% |
Blast2go | isocitrate metabolic process | GO:0006102 | Biological Process | 0.0 | 91% |
Blast2go | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | 91% |
Blast2go | citrate metabolic process | GO:0006101 | Biological Process | 0.0 | 91% |
Blast2go | copper ion binding | GO:0005507 | Molecular Function | 0.0 | 91% |
Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 91% |
Blast2go | aconitate hydratase activity | GO:0003994 | Molecular Function | 0.0 | 91% |
Blast2go | cell wall | GO:0005618 | Cellular Component | 0.0 | 91% |
Blast2go | mitochondrion | GO:0005739 | Cellular Component | 0.0 | 91% |
Blast2go | vacuolar membrane | GO:0005774 | Cellular Component | 0.0 | 91% |
Blast2go | chloroplast | GO:0009507 | Cellular Component | 0.0 | 91% |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | IPR015931 | - | 0.0 | - |
Sma3 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha | IPR001030 | - | 0.0 | - |
Sma3 | Aconitase/isopropylmalate dehydratase | IPR015937 | - | 0.0 | - |
Sma3 | Aconitase/3-isopropylmalate dehydratase, swivel | IPR015928 | - | 0.0 | - |
Sma3 | Aconitase/iron regulatory protein 2 | IPR006249 | - | 0.0 | - |
Sma3 | Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase | IPR015934 | - | 0.0 | - |
Sma3 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 | IPR015932 | - | 0.0 | - |
Sma3 | Aconitase family, 4Fe-4S cluster binding site | IPR018136 | - | 0.0 | - |
Sma3 | Aconitase A/isopropylmalate dehydratase small subunit, swivel | IPR000573 | - | 0.0 | - |
Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Non coding ORF found >= 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain