SustainPineDB

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Assembly Name: inia v1.0

UniGene Name: inia_v1.0_unigene5191

Length: 428 nt

UniGene Fasta

>inia_v1.0_unigene5191
AAAGGTAAAGGTCTATATGGGAGATGGTTGGAGGTATGACTTCAAGAAAACTCATTTTGACGCCTACTCCCCGCCTGACTTTTATACGAAGATTGGGATTGTAGGTGTAACTGCTGACTCAAAAATGGCAAGGACCCGTAAAATCGAAGATAACTGGATTCCATGTTGGGATGAAGAGTTTACTTTCCCTTTGACTGTCCCAGAGCTAGCTTTGCTTCGGATTCAGGTTGGGGAGTATGATATGTCTGAGAAGGATGACTTTGGTGGTCAGACATGCTTACCTGTGACAGAATTGAAGTCAGGGATTCGCTCTACTCCCCTCTTCAGTAAGAAAGGAGAAAAATACAGGTCTGTGAAGCTTTTGCTTCGCATTGAATTTGTCTGATTATCTTGATTACCCCATAGTCATGCCTTTTACTATTTTTAAT

Ace file of the UniGene inia_v1.0_unigene5191

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene20680	6/6

Source	Descriptions	Term	Type	Identity
AutoFact	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9T5Y1_RICCO	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	75%
Blast2go	phospholipase c	-	-	73%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	Phospholipase C, phosphatidylinositol-specific , X domain	IPR000909	-	-
Sma3	Phosphoinositide phospholipase C	IPR001192	-	-
Sma3	Phospholipase C, phosphatidylinositol-specific, Y domain	IPR001711	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	Phospholipase C, phosphoinositol-specific, EF-hand-like	IPR015359	-	-
Sma3	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain	IPR017946	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-
Sma3	Integrin alpha chain, C-terminal cytoplasmic region, conserved site	IPR018184	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLW1

Fln msg: your sequence is shorter than subject: 128 - 597

Fln protein: KVKVYMGDGWRYDFKKTHFDAYSPPDFYTKIGIVGVTADSKMARTRKIEDNWIPCWDEEFTFPLTVPELALLRIQVGEYDMSEKDDFGGQTCLPVTELKSGIRSTPLFSKKGEKYRSVKLLLRIEFV*

Protein Length: 129

Fln nts: AAAGGTAAAGGTCTATATGGGAGATGGTTGGAGGTATGACTTCAAGAAAACTCATTTTGACGCCTACTCCCCGCCTGACTTTTATACGAAGATTGGGATTGTAGGTGTAACTGCTGACTCAAAAATGGCAAGGACCCGTAAAATCGAAGATAACTGGATTCCATGTTGGGATGAAGAGTTTACTTTCCCTTTGACTGTCCCAGAGCTAGCTTTGCTTCGGATTCAGGTTGGGGAGTATGATATGTCTGAGAAGGATGACTTTGGTGGTCAGACATGCTTACCTGTGACAGAATTGAAGTCAGGGATTCGCTCTACTCCCCTCTTCAGTAAGAAAGGAGAAAAATACAGGTCTGTGAAGCTTTTGCTTCGCATTGAATTTGTCTGA___TTATCTTGATTACCCCATAGTCATGCCTTTTACTATTTTTAAT

Fln Alignment:

mc_mira_c4556___KVKVYMGDGWRYDFKKTHFDAYSPPDFYTKIGIVGVTADSKMARTRKIEDNWIPCWDEEFTFPLTVPELALLRIQVGEYDMSEKDDFGGQTCLPVTELKSGIRSTPLFSKKGEKYRSVKLLLRIEF
B8LLW1________________KVKIYMGDGWNQEFKKTHFDTYSPPDFYTRVGIAGVPADTIMKRTRAIEDDWFPCWNEEFVFPLTVPELAVLRVEVHEYDMSEKDDFGGQTCVPVAELKSGIRTIPLCNKKGEKYKSVRLLVRIDF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain