SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: inia v1.0

UniGene Name: inia_v1.0_unigene4065

Length: 940 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene inia_v1.0_unigene4065 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24054	1/9
SustainPine v2.0	sp_v2.0_unigene60265	8/9

Source	Descriptions	Term	Type	Identity
AutoFact	ADP-ribosylation factor [Medicago sativa] emb\|CAI29265.1\| ADP-ribosylation factor 1 [Medicago truncatula]	-	-	98%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	adp-ribosylation factor	-	-	99%

Source	GOs	Term	Type	Identity
Blast2go	protein ADP-ribosylation	GO:0006471	Biological Process	99%
Blast2go	vesicle-mediated transport	GO:0016192	Biological Process	99%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	99%
Blast2go	intracellular	GO:0005622	Cellular Component	99%

Source	InterPros	Term	Type	Identity
Sma3		IPR006688	-	-
Sma3	Small GTPase superfamily, ARF/SAR type	IPR006689	-	-
Sma3	Small GTP-binding protein domain	IPR005225	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
12	88		11		0.923564
37	90		10		0.90298

SSRs (tot: 1)

Start position	End position	Sequence	Length
20	38	TA TA TA TA TA TA TA TA TA T	19

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain