SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene55756

Length: 737 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene55756

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene16773	5/15
SustainPine v2.0	sp_v2.0_unigene82821	10/15

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	unknown [Picea sitchensis]	-	-	2.19973e-10	87%

Full-Lengther Next Prediction

SNPs (tot: 57)

Position	A %	C %	G %	T %	Probability
84		33		66	0.997458
86			66	33	0.997458
95	33	33		33	0.997753
97			75	25	0.996478
99	33		50		1.0
101	33	33		33	1.0
103	16			83	0.994515
104		33	16		1.0
105	66		16		0.988814
108			40	60	1.0
109		50		50	1.0
110	16		50		1.0
111	42	14	42		1.0
112		42	14	42	1.0
115			50	50	1.0
117		85	14		0.993534
119		50	50		1.0
120		14	42	42	1.0
121		85		14	0.993534
122	33			16	1.0
123		16	16		0.988813
124			14	71	0.984337
127		83	16		0.994512
130	16			83	0.994512
131		16	83		0.994512
132			83	16	0.994512
134	16	83			0.994512
203		88		11	0.923776
204	77		22		0.999999
205	88			11	0.92373
207	77	11			0.968132
208	77		11	11	0.968167
212		25	75		1.0
213	75			25	1.0
215			87	12	0.992554
217	87			12	0.992554
219		12	75	12	0.975346
220		12		87	0.992554
221	11		77		0.968132
225	12	12	75		0.975346
226	12	87			0.992554
350	9		54	36	1.0
402	90			10	0.903175
407	90	10			0.903229
409		11	88		0.923584
444	88	11			0.923667
449		88	11		0.923667
450	88			11	0.923667
454		11	88		0.923667
456	87			12	0.992554
457			11	88	0.924009
458			11	88	0.924009
459		11		88	0.924009
463	87	12			0.992554
464	14			85	0.993533
467		12	37	50	1.0
485			50	50	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
156	169	AGC AGC AGC AGC AG	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain