SustainPineDB

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene55629

Length: 772 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene55629

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24079	6/12
SustainPine v2.0	sp_v2.0_unigene82649	5/12

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 78A4 n=1 Tax=Pinus radiata RepID=C78A4_PINRA	-	-	92%
FL-Next	sp=Cytochrome P450 78A4; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	92%
Blast2go	cytochrome p450	-	-	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	regulation of meristem growth	GO:0010075	Biological Process	0.0	76%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3		IPR017973	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-

Full-Lengther Next Prediction

SNPs (tot: 48)

Position	A %	C %	G %	T %	Probability
129		66	33		0.997476
130		66		33	0.997476
132	66		33		0.997471
133	66			33	0.997471
134		66	33		0.997471
151	33			66	0.997456
156	75	25			0.996483
157	33		66		0.997452
159		25		75	0.996481
160		75	25		0.996481
161		75		25	0.996481
163	25			75	0.996481
166			75	25	0.996481
167			66	33	0.997452
168	66		33		0.997452
170	66	33			0.997452
171			66	33	0.997452
176		25		75	0.99649
178		25		75	0.99649
179	25			75	0.99649
181	33		66		0.997452
246		66		33	0.997452
253	33	66			0.997452
264		83	16		0.994523
266			66	33	1.0
267	66	33			1.0
268	66		33		1.0
269	66			33	1.0
271	33		66		1.0
277			60	40	1.0
281	33	33			1.0
285		66		33	1.0
288		66	33		1.0
293	30	10	50		1.0
294		33		55	1.0
295	11	11		77	0.968132
296	66	22	11		0.999999
298		10		70	0.999998
310			80	20	0.999996
312	10			90	0.90298
315		10	90		0.90298
316	10			90	0.90298
317		10		90	0.90298
318	10		90		0.90298
322	20	80			0.999996
443	55		44		1.0
450	88		11		0.923646
489		12		87	0.992555

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain