SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: uagpf v2.0

UniGene Name: uagpf_v2_unigene53771

Length: 636 nt

UniGene Fasta

Ace file of the UniGene uagpf_v2_unigene53771

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene22965	3/4

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	36%
Blast2go	protein	-	-	72%

Source	InterPros	Term	Type	Identity
Sma3	WD40 repeat	IPR001680	-	-
Sma3	F-box domain, cyclin-like	IPR001810	-	-
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
259		66	33		0.997471
260	33		66		0.997471
262		66	33		0.997471
264	33			66	0.997471
265			66	33	0.997471
266	66	33			0.997476
269		33		66	0.997476
271		50	50		1.0
273		75		25	0.996476
274		50		50	1.0
275	33		66		0.997452
276		33		66	0.997452
277		75	25		0.996476
280	25			50	0.995533
282	50		25		0.995533
283	66			33	0.997452
285			33	66	0.997452
286		75	25		0.99649
292	33	66			0.997452
293		25		75	0.99649
295		25		75	0.99649
296	25			75	0.99649

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain